EY649895

Overview
NameEY649895
Unique NameEY649895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3_MOUSE (Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.338e-25
Identity = 67/237 (28.27%), Postives = 132/237 (55.70%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L + K EDL+ M++LFS++P GL  +      ++  +G ALV        +++ E ++ V      +++ +++L  ++  ++ + F N  LF +++   FE F N     S S E L+ F D+ LKK G + L+++ +E  L+K + L  ++ +KD+F  +Y
Sbjct:  213 SAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYY 432          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 8.278e-25
Identity = 67/237 (28.27%), Postives = 131/237 (55.27%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +A ++  ++  ++ E+S   Y+ K E  +  E +RV H L  S+E  +++ V+ EL+S +   ++E E+SG   +L + K EDL  M++LFS++P GL  +      ++  +G ALV        +++ E ++ V      +++ +++L  ++  ++ + F N  LF +++   FE F N     S S E L+ F D+ LKK G + L+++ +E  L+K + L  ++ +KD+F  +Y
Sbjct:  213 SAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSSYLREQGKALV--------SEEGEGKNPVD-----YIQGLLDLKSRFDRFLLESFNNDRLFKQTIAGDFEYFLN---LNSRSPEYLSLFIDDKLKK-GVKGLTEQEVETILDKAMVLFRFMQEKDVFERYY 432          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL2_MOUSE (Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 9.153e-24
Identity = 71/239 (29.71%), Postives = 118/239 (49.37%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  YY ++ASN + E +C  YM K    LK E+ R   YLH SS  K++ + Q  +++ +    L+  HS CH+++  ++  D++ M+ L   +  GL  +    ++H+  EG         A SN   E          +FV  V+E+H K++  +N        F  +L +A     N     S   + ELLA +CDN+LKK   + +++  +E+ L   + +  YI DKD+F +FY
Sbjct:  215 TGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADH----LQFLHSECHSIIQQERKNDMANMYVLLRAVSSGLPHMIEELQKHIHDEGLR-------ATSNLTQEH------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFY 435          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL2_PONAB (Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.039e-23
Identity = 71/239 (29.71%), Postives = 116/239 (48.54%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  YY ++ASN + E +C  YM K    LK E+ R   YLH SS  K++ + Q  +++ +    L+  H+ CH ++  +K  D++ M+ L   +  GL  +    + H+  EG         A SN   E          +FV  V+E+H K++  +N        F  +L +A     N     S   + ELLA +CDN+LKK   + +++  +E+ L   + +  YI DKD+F +FY
Sbjct:  215 TGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADH----LQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDEGLR-------ATSNLTQEN------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFY 435          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL2_HUMAN (Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.039e-23
Identity = 71/239 (29.71%), Postives = 116/239 (48.54%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGS--SSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  YY ++ASN + E +C  YM K    LK E+ R   YLH SS  K++ + Q  +++ +    L+  H+ CH ++  +K  D++ M+ L   +  GL  +    + H+  EG         A SN   E          +FV  V+E+H K++  +N        F  +L +A     N     S   + ELLA +CDN+LKK   + +++  +E+ L   + +  YI DKD+F +FY
Sbjct:  215 TGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADH----LQFLHAECHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDEGLR-------ATSNLTQEN------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFY 435          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_SCHPO (Cullin-1 OS=Schizosaccharomyces pombe GN=cul1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.663e-23
Identity = 70/242 (28.93%), Postives = 119/242 (49.17%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEG-TALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV----AGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y++++S ++   S  DY+ KAE  L  E++ V  YLH S+   LLE  +  L++ +   L    H+    +L  +  ED+ RM+RL S+ P GL P+   F++ V   G  A+ K+          + ++        ++  ++  +      VN  F   T F KSL  AF    N+ V    + S S ELLA + D+IL+K   + +  + +E+ L  ++ +  Y+ DKD+F  FY
Sbjct:  233 TKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEATEDVLIAQHEEVL----HNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSGFAAVAKIVPQVGGEADVDPKE--------YMEMLLSTYKASKELVNTAFHGDTDFTKSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRK-SNKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFY 461          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.322e-22
Identity = 70/237 (29.54%), Postives = 123/237 (51.90%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T   Y+ +    + E   P+Y+    + L+ E DRV  YL  S++  L+  V+ +LL  +   +L+K   G   LL +++V DL++M++LFS++  G   +   + +++   GTA+V   E                +++  V+ +++  DK    +  CFQ +  F   +KE+FE F NK    +  AEL+A   D+ L+  G +E +DE +E TL+K++ L  +I  KD+F  FY
Sbjct:  239 TNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHWSEYIKTFGTAIVINPE----------------KDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINK--RPNKPAELIAKHVDSKLR-AGNKEATDEELERTLDKIMILFRFIHGKDVFEAFY 453          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 5.022e-22
Identity = 64/237 (27.00%), Postives = 128/237 (54.01%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T   Y+ +    + E   P+Y+    + L+ E DR+  YL  +++  L+  V+ +LL  +   +L+K   G + LL +++++DLS +++LFS++  G+  +   + +++ A G+ +V   E                +++  V+++++  DK    ++ CF  +  F  ++KEAFE F NK    +  AEL+A + D+ L + G +E +DE +E+ L+K++ +  +I  KD+F  FY
Sbjct:  375 TNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPE----------------KDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK--RPNKPAELIAKYVDSKL-RAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFY 589          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.559e-22
Identity = 68/237 (28.69%), Postives = 122/237 (51.48%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T   Y+ +    + +   P+Y+    + L+ E DRV  YL  S++  L+  V+ +LL  +   +L+K   G   LL +++V DL++M++LFS++  G + +   + +++   GT +V   E                +++  V+ +++  DK    V  CFQ +  F   +KE+FE F NK    +  AEL+A   D+ L+  G +E +DE +E  L+K++ L  +I  KD+F  FY
Sbjct:  239 TNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILQK---GLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIKTFGTTIVINPE----------------KDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINK--RPNKPAELIAKHVDSKLR-AGNKEATDEELERILDKIMILFRFIHGKDVFEAFY 453          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL2_CAEEL (Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.616e-20
Identity = 69/240 (28.75%), Postives = 116/240 (48.33%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSS---SAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  YYS  A   + + SC +YM +    L++E+ R   YLH SS  K++   Q  ++  + ++L    H+ CH L+ +++ +DL  M+RL   I  GL  +   F+++V  +G        +A S    E         Q FV  V+ +++K+       F +   F   L +A +   N    G S   ++E LA + D +LKK   + LS+  +E  L+  + +  YI DKD+F +FY
Sbjct:  231 TEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKVITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEYVKKKGL-------EAVSRLTGEN------VPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKK-STKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFY 452          
The following BLAST results are available for this feature:
BLAST of EY649895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CUL3_MOUSE6.338e-2528.27Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1[more]
CUL3_HUMAN8.278e-2528.27Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2[more]
CUL2_MOUSE9.153e-2429.71Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2[more]
CUL2_PONAB2.039e-2329.71Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1[more]
CUL2_HUMAN2.039e-2329.71Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2[more]
CUL1_SCHPO2.663e-2328.93Cullin-1 OS=Schizosaccharomyces pombe GN=cul1 PE=1... [more]
CUL4A_HUMAN1.322e-2229.54Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3[more]
CUL4B_HUMAN5.022e-2227.00Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3[more]
CUL4A_MOUSE6.559e-2228.69Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1[more]
CUL2_CAEEL1.616e-2028.75Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649895 ID=EY649895; Name=EY649895; organism=Citrus sinensis; type=EST; length=1010bp
CCTTCTGGTCCGCCTGCCAGTACTCGGTCCGNATTCCCGGGCCCGACCCC
GCGTCCGATGAAAATGATTTTGAAACTGCCATGCTTAAAGAACAGCTGCA
TATTATTCACGGAAAGCTTCAAACTGGATCTTAGAAGATTCCTGTCCAGA
CTATATGTTAAAGGCTGAGGAGTGTCTGAAAAGGGAGAAAGATAGGGTTT
CTCATTACTTGCATTCTAGTAGTGAGCCAAAGTTACTAGAGAAAGTTCAA
CATGAGTTATTGTCAGTATATGCAAATCAACTGCTTGAGAAAGAGCACTC
AGGATGCCATGCATTGCTCATAGACGACAAGGTGGAGGATTTGTCAAGAA
TGTTCAGGCTCTTTTCTAAAATACCCCGAGGCTTATATCCTGTTTCGAAC
ATCTTTAAGCAGCATGTTACTGCTGAAGGTACAGCCTTGGTGAAACTGGC
TGAAGATGCAGCAAGCAATAAGAAGGCAGAGAAAAGGGATGTGGTCGGCT
TACAGGAGCAGGTTTTTGTCAGGAAAGTGATTGAGTTGCATGACAAGTAC
TTAGCATATGTAAATGATTGTTTCCAGAACCACACTCTCTTCCATAAGTC
TCTTAAGGAGGCTTTTGAGGTCTTCTGCAACAAGGGTGTTGCTGGAAGCT
CAAGTGCGGAACTCCTGGCCACTTTCTGTGATAATATTCTTAAGAAAGGT
GGGGAGCGAGAACTTAGTGATGAAAGCATTGAAGAAACGCTTGAGAAGGT
GGTGAAGCTGCTTGCATATATTAGTGACAAAGACTTATTCGCTGAATTCT
ACAGGAAAAAACTTGCTCGGCGGCTTCTTTNNTGACAGACGCTNATGATG
ATCATGAGAGAAGTATTTTGACGAAGCTGAAGCACAGTGTGGTGGTCAGT
TCACCTCAAGATGGAGGAATGGTTACNGACTAACATTGCGAAGGAAAACA
AACCATTTCGAGGATTATCTTACAATACCCTATGCAATNCAGGATAGATT
GGCATTACTG
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