EY649895

Overview
NameEY649895
Unique NameEY649895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL1_DROME (Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.616e-20
Identity = 70/247 (28.34%), Postives = 120/247 (48.58%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKE----HSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGT-ALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGV-----AGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T+A+Y +++  ++  ++  +Y+   E  L+ E  RV  +   +    L E     L S     L+EK     H+    LL  D+ +DL RM+ L +   + L  + +I + H+  +GT A+ K     A+N             + +V+ ++++H KY A V   F N   F  +L +A   F N  V     + S S ELLA +CD +LKK  +    D+ +E+ L +V+ +  YI DKD+F ++Y
Sbjct:  231 TSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEAIAKCCTTDAAN-----------DPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNP-EDKELEDNLNQVMVVFKYIEDKDVFQKYY 465          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL2_DICDI (Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.756e-20
Identity = 67/240 (27.92%), Postives = 120/240 (50.00%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAG---SSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y+R++  +I       YM KAE  +  E+ R   YL+SSS  K+  ++ H +L     +LL+ E   C   L D+K++++  M++L S+I  GL PV    ++++   G   +K   D  +              +++V  +++++ ++ + +   F N   F   L  A     N+       + S ELLA +CD +LKKG ++    E +EE L +++ L  Y+ DKD+F +FY
Sbjct:  206 TRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQKYLNSSSHDKM-RRLLHSILIEKHKELLQSE---CINYLKDEKLDEIYNMYKLLSRIEGGLAPVLETVQKYIQHVGIDAIKSIPDRNNP-----------DPKIYVETLLKIYLQFSSIIKKSFNNDVSFITVLDLACHKIFNQNHITRNTTKSPELLAKYCDMLLKKGNKQHEEIE-LEEKLGQIIVLFKYVDDKDVFQKFY 429          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL5_DICDI (Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.139e-20
Identity = 64/240 (26.67%), Postives = 125/240 (52.08%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAG-------SSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLF 790
            T  +Y  +++++I ++   +YM      +++E +RV+ Y+  S+  KL + + + L+S Y  Q   K       +LI+DK  DL  M+ L S++   L P+ NIF   + +EG     L E  ++ K+A+++       QV +  +++++ ++   + +C+ N T F  ++ ++F +  N+  A        S+   +L+ FCD IL+KG      +  +E+ L + V L  Y+ DKD+F
Sbjct:  205 TETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTLEKLTKILNNVLISNYKEQFASKFLD----ILIEDKSSDLVMMYSLLSRVNH-LTPLKNIFSDFIKSEG-----LKEIESNLKEAQEKP------QVLISILLKIYSRFNIMIKECYGNDTDFTTAMDKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRKGPHHISDEAELEKKLTEAVCLFKYLPDKDIF 428          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.746e-18
Identity = 62/237 (26.16%), Postives = 120/237 (50.63%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y  + ++ I E   P Y+    E L +E +R+  YL  S++ +L+  +  +L+  + + +LEK   G +A++  D++EDL ++++L + +   +  +   ++ ++   G  ++   E                +E   ++ +++  D+    ++  F  + L   +LKE+FE F N     +  AEL+A F D+ LK GG+R +S+E +E  L K + L  YI  KD+F  FY
Sbjct:  249 TNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEK---GFNAMVNGDRLEDLGKLYQLLNSVGE-IKKIKESWQSYIKQTGIQMLNDKE----------------KEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFIN--TKQNKPAELVARFIDSKLKVGGKR-MSEEELETVLNKSLILFRYIQGKDVFEAFY 462          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.746e-18
Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKR-DVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y  ++S  I      +Y+ KAE+  + EK+R  +YL +     LL  V+ ELLS + + LLE + +G  +++     E L  ++  FS++  G+  +     ++V   G  + +    A   K A  R         ++V+KV+ L D+    ++           SL +AF  F +     + + E ++ F D+ LKK   R+  + SIE TL+  V L  +IS+KD+F ++Y
Sbjct:  236 TRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHGKLINETTSQALEGKMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADRSILNSLSDAFVTFVD---GYTRAPEYISLFIDDNLKKDA-RKAIEGSIEATLQNSVTLFRFISEKDVFEKYY 469          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL5_RABIT (Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.725e-17
Identity = 62/257 (24.12%), Postives = 120/257 (46.69%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCN-------------KGVA-----GSSSAELLATFCDNILKKGG-ERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y  +A +++ ++   +YM  A+  LK E+ R   YL +  E   +E +    ++       E   + C  ++  ++ E L  MF L  K+P G+ P+    ++H+ + G A +V  AE             +    + +V +++ L +++   V + FQ+   F  +  +A++   N             KGV       S   ELLA +CD +L+K    ++L+ E IE  L++V+ +L Y+ +KD+F  ++
Sbjct:  210 TERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAE------------TITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYH 454          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.725e-17
Identity = 62/257 (24.12%), Postives = 120/257 (46.69%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCN-------------KGVA-----GSSSAELLATFCDNILKKGG-ERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y  +A +++ ++   +YM  A+  LK E+ R   YL +  E   +E +    ++       E   + C  ++  ++ E L  MF L  K+P G+ P+    ++H+ + G A +V  AE             +    + +V +++ L +++   V + FQ+   F  +  +A++   N             KGV       S   ELLA +CD +L+K    ++L+ E IE  L++V+ +L Y+ +KD+F  ++
Sbjct:  210 TERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAE------------TITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYH 454          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL5_HUMAN (Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4)

HSP 1 Score: 89.3521 bits (220), Expect = 3.725e-17
Identity = 62/257 (24.12%), Postives = 120/257 (46.69%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCN-------------KGVA-----GSSSAELLATFCDNILKKGG-ERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y  +A +++ ++   +YM  A+  LK E+ R   YL +  E   +E +    ++       E   + C  ++  ++ E L  MF L  K+P G+ P+    ++H+ + G A +V  AE             +    + +V +++ L +++   V + FQ+   F  +  +A++   N             KGV       S   ELLA +CD +L+K    ++L+ E IE  L++V+ +L Y+ +KD+F  ++
Sbjct:  210 TERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAE------------TITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYH 454          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL5_PONAB (Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 4.864e-17
Identity = 62/257 (24.12%), Postives = 120/257 (46.69%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCN-------------KGVA-----GSSSAELLATFCDNILKKGG-ERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y  +A +++ ++   +YM  A+  LK E+ R   YL +  E   +E +    ++       E   + C  ++  ++ E L  MF L  K+P G+ P+    ++H+ + G A +V  AE             +    + +V +++ L +++   V + FQ+   F  +  +A++   N             KGV       S   ELLA +CD +L+K    ++L+ E IE  L++V+ +L Y+ +KD+F  ++
Sbjct:  210 TERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAE------------TITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAIYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYH 454          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 6.353e-17
Identity = 62/257 (24.12%), Postives = 120/257 (46.69%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTA-LVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCN-------------KGVA-----GSSSAELLATFCDNILKKGG-ERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y  +A +++ ++   +YM  A+  LK E+ R   YL +  E   +E +    ++       E   + C  ++  ++ E L  MF L  K+P G+ P+    ++H+ + G A +V  AE             +    + +V +++ L +++   V + FQ+   F  +  +A++   N             KGV       S   ELLA +CD +L+K    ++L+ E IE  L++V+ +L Y+ +KD+F  ++
Sbjct:  210 TERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAE------------TITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYH 454          
The following BLAST results are available for this feature:
BLAST of EY649895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CUL1_DROME1.616e-2028.34Cullin homolog 1 OS=Drosophila melanogaster GN=lin... [more]
CUL2_DICDI2.756e-2027.92Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 ... [more]
CUL5_DICDI6.139e-2026.67Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 ... [more]
CUL4_DICDI5.746e-1826.16Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 ... [more]
CUL3_SCHPO5.746e-1827.31Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1... [more]
CUL5_RABIT3.725e-1724.12Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=... [more]
CUL5_MOUSE3.725e-1724.12Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3[more]
CUL5_HUMAN3.725e-1724.12Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4[more]
CUL5_PONAB4.864e-1724.12Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3[more]
CUL5_RAT6.353e-1724.12Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649895 ID=EY649895; Name=EY649895; organism=Citrus sinensis; type=EST; length=1010bp
CCTTCTGGTCCGCCTGCCAGTACTCGGTCCGNATTCCCGGGCCCGACCCC
GCGTCCGATGAAAATGATTTTGAAACTGCCATGCTTAAAGAACAGCTGCA
TATTATTCACGGAAAGCTTCAAACTGGATCTTAGAAGATTCCTGTCCAGA
CTATATGTTAAAGGCTGAGGAGTGTCTGAAAAGGGAGAAAGATAGGGTTT
CTCATTACTTGCATTCTAGTAGTGAGCCAAAGTTACTAGAGAAAGTTCAA
CATGAGTTATTGTCAGTATATGCAAATCAACTGCTTGAGAAAGAGCACTC
AGGATGCCATGCATTGCTCATAGACGACAAGGTGGAGGATTTGTCAAGAA
TGTTCAGGCTCTTTTCTAAAATACCCCGAGGCTTATATCCTGTTTCGAAC
ATCTTTAAGCAGCATGTTACTGCTGAAGGTACAGCCTTGGTGAAACTGGC
TGAAGATGCAGCAAGCAATAAGAAGGCAGAGAAAAGGGATGTGGTCGGCT
TACAGGAGCAGGTTTTTGTCAGGAAAGTGATTGAGTTGCATGACAAGTAC
TTAGCATATGTAAATGATTGTTTCCAGAACCACACTCTCTTCCATAAGTC
TCTTAAGGAGGCTTTTGAGGTCTTCTGCAACAAGGGTGTTGCTGGAAGCT
CAAGTGCGGAACTCCTGGCCACTTTCTGTGATAATATTCTTAAGAAAGGT
GGGGAGCGAGAACTTAGTGATGAAAGCATTGAAGAAACGCTTGAGAAGGT
GGTGAAGCTGCTTGCATATATTAGTGACAAAGACTTATTCGCTGAATTCT
ACAGGAAAAAACTTGCTCGGCGGCTTCTTTNNTGACAGACGCTNATGATG
ATCATGAGAGAAGTATTTTGACGAAGCTGAAGCACAGTGTGGTGGTCAGT
TCACCTCAAGATGGAGGAATGGTTACNGACTAACATTGCGAAGGAAAACA
AACCATTTCGAGGATTATCTTACAATACCCTATGCAATNCAGGATAGATT
GGCATTACTG
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