EY649895

Overview
NameEY649895
Unique NameEY649895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.415e-16
Identity = 59/239 (24.69%), Postives = 115/239 (48.12%), Query Frame = 2
Query:   92 TAAYYSRKASNWIL--EDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T+ YY     NW+    D+C  Y+ + E  +  E  R S YL   +E K+L+ +   +++ +   ++  ++ G   +L   K+EDL+R+FR+F +I   +       K  + A    L +   +   N+   K  V       FV ++++L D + + +   F +   F    +  FE F N   +   S E +A + D++L + G + +SD  ++  L+ V+ L  Y+ +KD+F +++
Sbjct:  211 TSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRASRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLKNPV------NFVNELLQLKDYFSSLLTTAFADDRDFKNRFQHDFETFLN---SNRQSPEFVALYMDDML-RSGLKCVSDAEMDNKLDNVMILFRYLQEKDVFEKYF 438          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL6_CAEEL (Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.378e-16
Identity = 67/247 (27.13%), Postives = 120/247 (48.58%), Query Frame = 2
Query:   92 TAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEG-TALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCNKGVA---------GSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            T  +Y ++  N   +++  +YM+  E  L +E+ R   YL  S+   L++  +  L+S      L+  HS    LL   K E L+RM+ L  ++  GL  +    ++ +  EG   L +LA+D+      ++          ++ K++E+H+ Y   +N  F  + LF +SL +A + F                + SA+ LA +CD +LKK  +  + DE+    L+K + +L YIS+KD+F  +Y
Sbjct:  197 TKLFYKQEVLN--SKETVIEYMITVENRLFQEEYRSRRYLGPSTNDLLIDSCESILIS----DRLKFLHSEFERLLEARKDEHLTRMYSLCRRVTHGLEDLRVYLEKRILKEGHETLQRLAKDSGLKTTPKE----------YITKLLEVHEIYFNLINKAFDRNALFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKKNSK--VQDET---ALDKALTVLKYISEKDVFQLYY 422          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CUL5_CAEEL (Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.044e-15
Identity = 65/256 (25.39%), Postives = 117/256 (45.70%), Query Frame = 2
Query:   89 RTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYL--HSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRLFSKIPRGLYPVSNIFKQHVTAEGTALVKLAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCN------------KG---VAGSSSAELLATFCDNILKKGG-ERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +T  YY +   N + E    +YM+ A++ L+ E+ R   YL  +S +  K +EK    L+  + + +L +    C  L+    VE L R++RL  +   G+  V      H+  EG            N      + +    + +V++++ + DK+ + V + F +      +  +AF    N            KG      S  AELLA +CD +L+K    ++L+ E I+E L +V+ +L Y+ +KD+F  F+
Sbjct:  194 QTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTSGKHMEKAVIALVESFEDTILAE----CSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCIDTHIRTEGL-----------NDMRNNAENLSTDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKAFRAVVNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFH 434          
BLAST of EY649895 vs. ExPASy Swiss-Prot
Match: CDC53_YEAST (Cell division control protein 53 OS=Saccharomyces cerevisiae GN=CDC53 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.154e-12
Identity = 58/262 (22.14%), Postives = 123/262 (46.95%), Query Frame = 2
Query:   89 RTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLIDDKVEDLSRMFRL----FSKIPRGLYPVSNIFKQHVTAEGTALVK----------LAEDAASNKKAEKRDVVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKSLKEAFEVFCN----------KGVAGSSSAELLATFCDNILKKGGERELSDESIEETLEKVVKLLAYISDKDLFAEFY 802
            +T  YY++  ++++ + S  +Y+ +A E +KRE+  ++ Y    ++  L   +   L++ +    +EK  +    LL    +E ++ ++ L    F+ IPR    ++++F+ +V   G   +           +  + A+ KK        L  + +++K++E+HD +    N+ F +     K+L  A   F N             A S ++E+LA + D +LKK  + E++ +  +   E ++ +  Y++DKD F   Y
Sbjct:  231 KTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTKKPLSMALNKVLITDH----IEKLENEFVVLLDARDIEKITSLYALIRRDFTLIPR----MASVFENYVKKTGENEISSLLAMHKHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEVASDMSD---EDIITIFKYLTDKDAFETHY 481          
The following BLAST results are available for this feature:
BLAST of EY649895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CUL3_CAEEL1.415e-1624.69Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 S... [more]
CUL6_CAEEL5.378e-1627.13Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 S... [more]
CUL5_CAEEL2.044e-1525.39Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 S... [more]
CDC53_YEAST6.154e-1222.14Cell division control protein 53 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-004-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649895 ID=EY649895; Name=EY649895; organism=Citrus sinensis; type=EST; length=1010bp
CCTTCTGGTCCGCCTGCCAGTACTCGGTCCGNATTCCCGGGCCCGACCCC
GCGTCCGATGAAAATGATTTTGAAACTGCCATGCTTAAAGAACAGCTGCA
TATTATTCACGGAAAGCTTCAAACTGGATCTTAGAAGATTCCTGTCCAGA
CTATATGTTAAAGGCTGAGGAGTGTCTGAAAAGGGAGAAAGATAGGGTTT
CTCATTACTTGCATTCTAGTAGTGAGCCAAAGTTACTAGAGAAAGTTCAA
CATGAGTTATTGTCAGTATATGCAAATCAACTGCTTGAGAAAGAGCACTC
AGGATGCCATGCATTGCTCATAGACGACAAGGTGGAGGATTTGTCAAGAA
TGTTCAGGCTCTTTTCTAAAATACCCCGAGGCTTATATCCTGTTTCGAAC
ATCTTTAAGCAGCATGTTACTGCTGAAGGTACAGCCTTGGTGAAACTGGC
TGAAGATGCAGCAAGCAATAAGAAGGCAGAGAAAAGGGATGTGGTCGGCT
TACAGGAGCAGGTTTTTGTCAGGAAAGTGATTGAGTTGCATGACAAGTAC
TTAGCATATGTAAATGATTGTTTCCAGAACCACACTCTCTTCCATAAGTC
TCTTAAGGAGGCTTTTGAGGTCTTCTGCAACAAGGGTGTTGCTGGAAGCT
CAAGTGCGGAACTCCTGGCCACTTTCTGTGATAATATTCTTAAGAAAGGT
GGGGAGCGAGAACTTAGTGATGAAAGCATTGAAGAAACGCTTGAGAAGGT
GGTGAAGCTGCTTGCATATATTAGTGACAAAGACTTATTCGCTGAATTCT
ACAGGAAAAAACTTGCTCGGCGGCTTCTTTNNTGACAGACGCTNATGATG
ATCATGAGAGAAGTATTTTGACGAAGCTGAAGCACAGTGTGGTGGTCAGT
TCACCTCAAGATGGAGGAATGGTTACNGACTAACATTGCGAAGGAAAACA
AACCATTTCGAGGATTATCTTACAATACCCTATGCAATNCAGGATAGATT
GGCATTACTG
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