EY649858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_DROME (40S ribosomal protein S2 OS=Drosophila melanogaster GN=sop PE=1 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 6.045e-80 Identity = 144/193 (74.61%), Postives = 167/193 (86.53%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLSVCXRHMASL 763 +WVPVTKLGRLVREGKI+SLE+IYL+SLPIKE++IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GH+GLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPC VTGKCGSV+VR++PAPRG GIV+A V KK+L A I+D +TS+RGST TLGN K + + A L Sbjct: 42 EWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYL 234
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_CRIGR (40S ribosomal protein S2 (Fragment) OS=Cricetulus griseus GN=RPS2 PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 4.956e-78 Identity = 136/178 (76.40%), Postives = 156/178 (87.64%), Query Frame = 2 Query: 191 VPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPC VTG+CGSV VR++PAPRG GIV+A V KK+L A IDD +TS+RG T TLGN K Sbjct: 1 IPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 178 HSP 2 Score: 32.7278 bits (73), Expect = 4.956e-78 Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSF 792 +ATF+ TY +LTPD W ET F Sbjct: 178 KATFDAISKTYSYLTPDLWKETVF 201
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_DICDI (40S ribosomal protein S2 OS=Dictyostelium discoideum GN=rps2 PE=1 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 4.139e-77 Identity = 137/178 (76.97%), Postives = 154/178 (86.52%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLV 721 W PVTKLGRLV G + ++ +IYL SLPIKEYQIID + LKDEVMKI+PVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKC+KEVATAI GAI+ AKLSVIPVRRGYWGNK+G PHTVP VTGKCGSV VR+VPAPRG GIVAARV KK+LQ+A +DDV+TSSRG T+T+GN V Sbjct: 49 WTPVTKLGRLVALGLVENIHEIYLFSLPIKEYQIIDKFLN--LKDEVMKIVPVQKQTRAGQRTRFKAFVVVGDHNGHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYWGNKLGAPHTVPTKVTGKCGSVAVRLVPAPRGTGIVAARVPKKLLQYAGVDDVYTSSRGKTRTMGNFV 224 HSP 2 Score: 32.7278 bits (73), Expect = 4.139e-77 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 724 ATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 ATF T+ +LTPD W E +K P Q+ Sbjct: 226 ATFFAITKTFAYLTPDLWREVKLIKTPYQE 255
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_SCHPO (40S ribosomal protein S2 OS=Schizosaccharomyces pombe GN=rps2 PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 5.401e-77 Identity = 134/180 (74.44%), Postives = 161/180 (89.44%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +WVPVTKLGRLV+ GKI+S+E+IYL+SLPIKEYQI+D + +L DEVMK++PVQKQTRAGQRTRFKAFVV+GD+DGHVGLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PHTVP V+GKCGSVTVR+VPAPRGAG+VAA V+K+ LQ A I+D +T SRGSTKTLGN VK Sbjct: 33 EWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFLP-RLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVK 211 HSP 2 Score: 28.4906 bits (62), Expect = 5.401e-77 Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 +A F TYG LTP+ W E F + P ++ Sbjct: 211 KAAFAAASLTYGILTPNLWAERPFGQTPIEE 241
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_CAEEL (40S ribosomal protein S2 OS=Caenorhabditis elegans GN=rps-2 PE=1 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 7.027e-74 Identity = 132/188 (70.21%), Postives = 155/188 (82.45%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLSVCXR 748 +W PVTKLGRLV+E KI +LE+IYL+SLPIKE++IID L + LKDEV+KI PVQKQT AGQRTRFKAFV +GD GHVGLGVKCSKEVATAIRGAI+ AKL+V+PVRRGYWGNKIG PHTVPC VTGKC SV VR++PAPRG GIV+A V KK+L A I+D +T+++GST TLGN K + R Sbjct: 56 EWTPVTKLGRLVKEKKITTLEEIYLNSLPIKEFEIIDALCSN-LKDEVLKISPVQKQTTAGQRTRFKAFVAIGDHAGHVGLGVKCSKEVATAIRGAIVAAKLAVVPVRRGYWGNKIGLPHTVPCKVTGKCASVMVRLIPAPRGTGIVSAPVPKKLLHMAGIEDCYTAAKGSTATLGNFAKATYAALQR 242 HSP 2 Score: 31.187 bits (69), Expect = 7.027e-74 Identity = 13/30 (43.33%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXETSFVKFPNQ 810 +AT+ TY +LTPD W E + K P Q Sbjct: 234 KATYAALQRTYSYLTPDLWKEEALEKSPYQ 263
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_LEIAM (40S ribosomal protein S2 OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 9.140e-71 Identity = 123/180 (68.33%), Postives = 150/180 (83.33%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGH-KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLV 721 +WVP TKLGRLV+ K+ SLE+I+L S+PIKE+QI+DTLI KL DE+MKI PVQK T AGQRTRFKAF VVGD DGH+G+G + KEV+ AIR ++I AKL+++PVRRGYWGNKIG PHT+P VTGKCGSV VR+VPAPRG GIVAA V KK+L+FA ++DV+TSSRG T+T GNL+ Sbjct: 44 EWVPCTKLGRLVKAQKVTSLEEIFLFSMPIKEHQIVDTLIAEGKLHDEMMKIYPVQKATSAGQRTRFKAFNVVGDCDGHIGIGARVGKEVSLAIRASMIAAKLNIVPVRRGYWGNKIGEPHTIPMKVTGKCGSVAVRLVPAPRGTGIVAAPVPKKILEFAGVEDVYTSSRGKTRTHGNLI 223 HSP 2 Score: 32.3426 bits (72), Expect = 9.140e-71 Identity = 14/30 (46.67%), Postives = 17/30 (56.67%), Query Frame = 1 Query: 724 ATFECXLXTYGFLTPDSWXETSFVKFPNQD 813 ATF TYGFLTPD W +T + P + Sbjct: 225 ATFYALRKTYGFLTPDLWADTEPSRDPTDE 254
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS2_YEAST (40S ribosomal protein S2 OS=Saccharomyces cerevisiae GN=RPS2 PE=1 SV=3) HSP 1 Score: 252.677 bits (644), Expect = 9.103e-68 Identity = 122/179 (68.16%), Postives = 151/179 (84.36%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 WVPVTKLGRLV+ GKI ++E+I+LHSLP+KE+QIIDTL+ L+DEVM I PVQKQTRAGQRTRFKA VVVGD++GHVGLG+K +KEVA AIR II+AKLSVIP+RRGYWG +G+PH++ TGKCGSVTVR++PAPRG+GIVA+ KK+LQ A ++DV+T S G T+TL N +K Sbjct: 35 WVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLLPG-LQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLK 212 HSP 2 Score: 26.5646 bits (57), Expect = 9.103e-68 Identity = 11/21 (52.38%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXE 783 +A F TYGFLTP+ W E Sbjct: 212 KAAFVAIGNTYGFLTPNLWAE 232
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_HYPBU (30S ribosomal protein S5P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps5p PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.501e-39 Identity = 88/182 (48.35%), Postives = 122/182 (67.03%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +W P T +GRLV+EG+IRSL +I+ +LPI E +I+D LIG +LK E + + VQK T AG+ RF+ VV+G+ +G VG+G ++++A AI AI AKL++IPVRR G W PH+VP V GK GSV V + PAPRG G+VA +K VL+ A I DV++ ++G T+T N VK Sbjct: 11 EWQPRTYVGRLVKEGRIRSLSEIFEKNLPILEPEIVDYLIGPELKSETVDVRLVQKMTDAGRINRFRVVVVIGNENGFVGVGQGKARQLAVAIEKAIRNAKLNIIPVRRGCGSWECLCSEPHSVPFTVRGKSGSVEVILKPAPRGTGLVAGDAAKVVLRLAGIRDVWSFTKGDTRTTINFVK 192 HSP 2 Score: 23.483 bits (49), Expect = 2.501e-39 Identity = 9/22 (40.91%), Postives = 12/22 (54.55%), Query Frame = 1 Query: 721 QATFECXLXTYGFLTPDSWXET 786 +AT+ TY F+TP W T Sbjct: 192 KATYNALKQTYKFVTPLDWART 213
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_THEPD (30S ribosomal protein S5P OS=Thermofilum pendens (strain Hrk 5) GN=rps5p PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.964e-39 Identity = 82/182 (45.05%), Postives = 127/182 (69.78%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +W P T LGRLV EGKI+S+++++ ++PI+E +IIDTL+ LK EV+ + VQ+QT +G+ ++++ V VG+ DG+VG+G+ S+++ AI A AKL+++PVRRG W G PH++P V GK GSV + ++PAP+G G+VA+ V+K VL+ A I DV++ S G T+T N+ K Sbjct: 4 EWQPRTLLGRLVVEGKIKSIDEVFARNMPIREVEIIDTLLPG-LKSEVLSVGFVQRQTDSGEVSQYQVTVAVGNEDGYVGVGMGKSRQIGIAIEKATRRAKLNIVPVRRGCGSWECLCGEPHSIPFKVEGKAGSVKIELIPAPKGVGLVASDVAKTVLRLAGIKDVWSRSYGETRTTHNMAK 184
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_PYRIL (30S ribosomal protein S5P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps5p PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.177e-39 Identity = 86/178 (48.31%), Postives = 124/178 (69.66%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGN 715 W P T+LGRLV+EGKIR++++I+ ++ IKE +I+D L+ LK E++ I VQ+QT AG+R++F+ V VG+ DG+VG+G+ +K+V AI A+ AKL++ PVRR G W PH+VP V GK GSV V ++PAP+G G+VA V+K VL+ A I DV+T +RG T+T N Sbjct: 9 WEPRTELGRLVKEGKIRTIDEIFANNYIIKEPEIVDILLPG-LKQEILNINVVQRQTHAGERSQFQVVVAVGNEDGYVGVGIGKAKQVRQAIEKAVREAKLNLTPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEVTLIPAPKGVGLVAGDVAKVVLRLAGIKDVWTQTRGDTRTTLN 185 The following BLAST results are available for this feature:
BLAST of EY649858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649858 ID=EY649858; Name=EY649858; organism=Citrus sinensis; type=EST; length=930bpback to top |