EY649858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_DEHE1 (30S ribosomal protein S5 OS=Dehalococcoides ethenogenes (strain 195) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTK-------TLGNL--VKQPLSVCXRHMASL 763 +L D+++ I V K + G+R F A VV GD HVG+GV +KEV +AI A AK ++ + + TVP + K G+ V + PA G GI+A + VL+ I D+ T S G + TLG L ++ P + + +SL Sbjct: 14 ELNDKLIFINRVTKVVKGGKRMGFAALVVTGDGKNHVGIGVGKAKEVPSAISKASANAKRNLSRI--------LLNGTTVPHEIVFKYGAAQVLLKPAAPGTGIIAGGSVRAVLESTGIKDILTKSMGCSNKANVAKATLGGLTAMRDPKTTVTKRRSSL 165
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_ACAM1 (30S ribosomal protein S5 OS=Acaryochloris marina (strain MBIC 11017) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 40/133 (30.08%), Postives = 69/133 (51.88%), Query Frame = 2 Query: 317 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGN 715 ++ V++I V K + G++ F+A VVVG+ G VG+GV + +V A+R + K ++ V + R +++P + G+ G+ V M PA G G++A + VL+ A + +V GS L N Sbjct: 20 QERVVQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKASDVIGAVRKGVADGKKQLVEV-------PLTRSNSIPHPMIGRGGAAKVMMRPAAPGTGVIAGGAVRTVLELAGVRNVLAKQLGSDNPLNN 145
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_THETN (30S ribosomal protein S5 OS=Thermoanaerobacter tengcongensis GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 2 Query: 314 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTD-GHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGST 700 LK+ V+ I V K + G+ RF VVVGD D G+VG+G + E+ AIR AI AK +I V +G T+P V G+ G+ V + PA G G++A + VL+ A I DV + S GS+ Sbjct: 11 LKERVVSINRVSKVVKGGKNFRFSVTVVVGDPDKGYVGVGRGKAAEIPDAIRKAIEDAKKHLIKVP------VVGT--TIPHEVIGEFGAGKVLLKPAREGTGVIAGGPVRAVLESAGIRDVLSKSLGSS 132
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_SYNR3 (30S ribosomal protein S5 OS=Synechococcus sp. (strain RCC307) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 317 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGN 715 ++ V++I V K + G++ F+A VVVG+ G VG+GV + +V A++ + K ++ V + R +++P TG+ G+ +V M PA G G++A + VL+ A I +V GS L N Sbjct: 63 QERVIQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVKKGVADGKKHLVKV-------PLTRSNSIPTISTGRDGAASVLMRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLGSKTPLNN 188
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_SYMTH (30S ribosomal protein S5 OS=Symbiobacterium thermophilum GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 42/137 (30.66%), Postives = 69/137 (50.36%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLV 721 +LK++++ + V K + G+R F A VVVGD +G VG G+ + E+ A+R AK +I + T+P V G+ G+ V + PA G G++A + VL+ A + D+ T S GS ++ Sbjct: 10 ELKEKMVDLRRVAKTVKGGRRMSFSAVVVVGDGNGRVGAGLGKAAEIPEAVRKGTEDAKKHMIKIPL--------NGTTIPHEVIGRFGAGKVLLKPASPGTGVIAGGAVRAVLEAAGVRDILTKSLGSNNAANQVL 138
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_BORBU (30S ribosomal protein S5 OS=Borrelia burgdorferi GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 43/148 (29.05%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 287 IIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAK--LSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 ++D K ++++ + V K + G+R F AF+VVGD +GHVG G + + + AI+ ++ A+ L +P+R+G T+P V G V + PA G G++A + V++ + D+ + S GS ++ N+VK Sbjct: 1 MVDVHAQRKQIEKLISLNRVTKVVKGGRRFSFAAFMVVGDGEGHVGWGFGKANDASDAIKKSLTSARKNLRFVPIRKG----------TLPHEVIGCFKKAKVLIKPATHGTGVIAGGPVRAVMEALGVHDILSKSLGSNNSM-NVVK 137
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_ANADF (30S ribosomal protein S5 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 47/129 (36.43%), Postives = 70/129 (54.26%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGS 697 +L+D+V+ I V K + G+R F A VVVGD +G+VG+G+ + EV AIR AK ++ V +G T+P V G G+ V + PA G G++A + VL+ A I +V T +GS Sbjct: 11 ELQDKVVHINRVAKVVKGGRRFSFSALVVVGDGNGYVGVGLGKANEVPEAIRKGGDQAKKNLFKV------PLVGT--TIPHEVLGHFGAGWVLLKPAGEGTGVIAGGTVRAVLEAAGIRNVLTKCQGS 131 The following BLAST results are available for this feature:
BLAST of EY649858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649858 ID=EY649858; Name=EY649858; organism=Citrus sinensis; type=EST; length=930bpback to top |