EY649858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_CLOP1 (30S ribosomal protein S5 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.517e-14 Identity = 53/141 (37.59%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 314 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLS 736 LK++V+ I V K + G+ RF A VVVGD +GHVG+G S E+ AIR I AK +++ V + +G TVP + GK G+ V ++PA G G++A ++ VL+ A + DV S GS N+VK ++ Sbjct: 10 LKEKVVSISRVTKVVKGGRNFRFSALVVVGDENGHVGVGTGKSIEIPEAIRKGIEDAKKNLVEV------SIVGT--TVPHEIHGKFGTGDVLIMPATEGTGVIAGGPARSVLELAGLKDVRAKSLGSNNP-RNMVKATIN 141
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_UREU1 (30S ribosomal protein S5 OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14 Identity = 47/140 (33.57%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 317 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLS 736 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ +V G+ G+ V ++PAP G GI+A + V++ A D++T SRG+ + N+++ ++ Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATIN 181
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_UREPA (30S ribosomal protein S5 OS=Ureaplasma parvum GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14 Identity = 47/140 (33.57%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 317 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLS 736 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ +V G+ G+ V ++PAP G GI+A + V++ A D++T SRG+ + N+++ ++ Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATIN 181
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_UREP2 (30S ribosomal protein S5 OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14 Identity = 47/140 (33.57%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 317 KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLS 736 ++ V+KI + K T+ G+ RF A VV+GD +G VG G+ S EV AI+ AI A ++I V++ G ++ +V G+ G+ V ++PAP G GI+A + V++ A D++T SRG+ + N+++ ++ Sbjct: 50 EERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQTKKG-------SIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATIN 181
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_FUSNN (30S ribosomal protein S5 OS=Fusobacterium nucleatum subsp. nucleatum GN=rpsE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14 Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 308 HKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGS 697 ++ +++++KI V K T+ G+ F VGD +G +GLG+ + V AIR AI AK +++ + + +T+P + GK G+ T+ M PA G G++A S+++L+ + D+ T +GS Sbjct: 7 NQYQEKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVKISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_BACSK (30S ribosomal protein S5 OS=Bacillus clausii (strain KSM-K16) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14 Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLS 736 +L+++V+ I V K + G+R RF A VVVGD +GHVG G+ ++EV AIR A+ AK ++I V T+P + G+ G+ V + PA G G++A + VL+ A I DV + S GS+ + N+V+ ++ Sbjct: 10 ELEEKVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGMGKAQEVPEAIRKAVEDAKKNLIEVPI--------VNTTIPHQIVGRFGAGRVFLKPASEGTGVIAGGPVRAVLELAGIGDVLSKSLGSSNPI-NMVRATIT 142
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_PEDPA (30S ribosomal protein S5 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14 Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +++D V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ A+ S+I V +G T+P G G + M PA G+G+ A + V++ A IDDV TS R + T N+V+ Sbjct: 11 EIEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVETARKSLIEV------PIVGT--TLPHEAVGVYGGGRILMKPALEGSGVAAGGAVRAVMELAGIDDV-TSKRLGSNTAVNVVR 139
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_OCEIH (30S ribosomal protein S5 OS=Oceanobacillus iheyensis GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14 Identity = 49/141 (34.75%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 314 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVKQPLS 736 L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AI+ A+ AK ++I V +G T+P + G+ GS V M PA G G+++ + +L+ A + D+ T S GS + N+++ L+ Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKNLISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGSNTPI-NMIRATLN 143
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_GEOSW (30S ribosomal protein S5 OS=Geobacillus sp. (strain WCH70) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14 Identity = 51/138 (36.96%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P V G G+ + + PA G G++A ++ VL+ A I D+ + S GS + N+V+ Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGKIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVR 138
BLAST of EY649858 vs. ExPASy Swiss-Prot
Match: RS5_GEOKA (30S ribosomal protein S5 OS=Geobacillus kaustophilus GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14 Identity = 51/138 (36.96%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCNVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFACIDDVFTSSRGSTKTLGNLVK 724 +L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P V G G+ + + PA G G++A ++ VL+ A I D+ + S GS + N+V+ Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVR 138 The following BLAST results are available for this feature:
BLAST of EY649858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649858 ID=EY649858; Name=EY649858; organism=Citrus sinensis; type=EST; length=930bpback to top |