EY649818 | Citrus Genome Database

Overview


Name	EY649818
Unique Name	EY649818
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	930

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.194e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 147.517 bits (371), Expect = 1.010e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 111.694 bits (278), Expect = 6.144e-24
Identity = 59/75 (78.67%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV AKIQD EG PPDQQR IFAGKQ EDGRTLADY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 75

HSP 4 Score: 103.99 bits (258), Expect = 1.281e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.659e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 146.362 bits (368), Expect = 2.251e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 1.369e-23
Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.473e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 110.153 bits (274), Expect = 1.788e-23
Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTLADY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 75

HSP 4 Score: 103.99 bits (258), Expect = 1.281e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.923e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 5.014e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV +KIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.923e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 5.014e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV +KIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.923e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 5.014e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV +KIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.923e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 5.014e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV +KIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.923e-35
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 5.014e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 57/75 (76.00%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV +KIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.736e-35
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 6.549e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTI NVKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 108.997 bits (271), Expect = 3.982e-23
Identity = 57/75 (76.00%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTI NV AK+QD EG PPDQQR IFAGKQ EDGRTLADY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 75

HSP 4 Score: 103.605 bits (257), Expect = 1.673e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAK+QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_NEUCR (Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.010e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 8.553e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 108.612 bits (270), Expect = 5.201e-23
Identity = 57/75 (76.00%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVESSDTIDNV  KIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 100.908 bits (250), Expect = 1.085e-20
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY649818 vs. ExPASy Swiss-Prot

BLAST of EY649818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_ARATH	1.194e-35	100.00	Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=...	[more]
UBIQ_COPCO	2.659e-35	98.68	Ubiquitin OS=Coprinus congregatus PE=1 SV=1	[more]
UBIQ_CHLRE	3.473e-35	98.68	Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=...	[more]
UBIQ_YEAST	5.923e-35	97.37	Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1...	[more]
UBIQ_SCHPO	5.923e-35	97.37	Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=...	[more]
UBIQ_KLULA	5.923e-35	97.37	Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=...	[more]
UBIQ_CRYNE	5.923e-35	97.37	Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ...	[more]
UBIQ_CANAL	5.923e-35	97.37	Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1	[more]
UBL1_ORYSJ	7.736e-35	97.37	Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja...	[more]
UBIQ_NEUCR	1.010e-34	97.37	Ubiquitin OS=Neurospora crassa GN=ubi-1 PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-003-H04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649818 ID=EY649818; Name=EY649818; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGGTAAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCA
GATCAGCAGAGGCTTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCAC
ACTTGCTGACTATAATATCCAGAAGGAATCAACCCTCCACTTGGTCCTTC
GACTTAGGGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACG
ATTACTCTTGAGGTGGAAAGCTCCGACACCATTGACAATGTGAAAGCCAA
GATTCAAGACAAGGAAGGGATCCCACCAGACCAACAGAGACTTATCTTTG
CCGGTAAACAGCTCGAGGATGGTCGCACACTTGCTGATTATAACATCCAG
AAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTATGCAGAT
CTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCT
CCGACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGAAGGGATC
CCACCAGACCAGCAAAGGCTCATCTTTGCTGGTAAACAACTAGAGGATGG
ACGCACACTTGCAGACTACAACATCCAGAATGAATCAACCCTTCATTTGG
TCCTCCGTCTCAAGGGTGGCATGCAGATTTTTGTGAAAACCCTGACCGGT
AAGACTATAACTTTGGAGGTTGAAAGCTCTGACACGATCGACAATGTCAA
TGCCAAGATCCAGGACATGGAGGGCATNCCACCTGATCAACAGAGGNTAA
TCTTTGCCGGCAAACAAACTGAAGATGGTCGTACTCTTGCTGACTACACA
TNCAGAAGGAGTCAACCTNNCATTTGTGCTCGTCTCCGTGGTGCATGCAG
ATCTTNGGAAAACCTCACCGAAAACAATACTCCTGAGGTGAAAGTCTGAC
CCTTGACACGTGAAGCAAAAATCAGACAGG