EY649818 | Citrus Genome Database

Overview


Name	EY649818
Unique Name	EY649818
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	930

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY649818 vs. ExPASy Swiss-Prot

BLAST of EY649818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_HUMAN	2.940e-34	96.05	Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1	[more]
UBIQ_HORSE	2.940e-34	96.05	Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2	[more]
UBIQ_GORGO	2.940e-34	96.05	Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 S...	[more]
UBIQ_FELCA	2.940e-34	96.05	Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1	[more]
UBIQ_DROME	2.940e-34	96.05	Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1...	[more]
UBIQ_CRIGR	2.940e-34	96.05	Ubiquitin OS=Cricetulus griseus PE=3 SV=1	[more]
UBIQ_CHICK	2.940e-34	96.05	Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1	[more]
UBIQ_CERCA	2.940e-34	96.05	Ubiquitin OS=Ceratitis capitata PE=1 SV=1	[more]
UBIQ_CAVPO	2.940e-34	96.05	Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1	[more]
UBIQ_CANFA	2.940e-34	96.05	Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-003-H04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649818 ID=EY649818; Name=EY649818; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGGTAAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCA
GATCAGCAGAGGCTTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCAC
ACTTGCTGACTATAATATCCAGAAGGAATCAACCCTCCACTTGGTCCTTC
GACTTAGGGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACG
ATTACTCTTGAGGTGGAAAGCTCCGACACCATTGACAATGTGAAAGCCAA
GATTCAAGACAAGGAAGGGATCCCACCAGACCAACAGAGACTTATCTTTG
CCGGTAAACAGCTCGAGGATGGTCGCACACTTGCTGATTATAACATCCAG
AAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTATGCAGAT
CTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCT
CCGACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGAAGGGATC
CCACCAGACCAGCAAAGGCTCATCTTTGCTGGTAAACAACTAGAGGATGG
ACGCACACTTGCAGACTACAACATCCAGAATGAATCAACCCTTCATTTGG
TCCTCCGTCTCAAGGGTGGCATGCAGATTTTTGTGAAAACCCTGACCGGT
AAGACTATAACTTTGGAGGTTGAAAGCTCTGACACGATCGACAATGTCAA
TGCCAAGATCCAGGACATGGAGGGCATNCCACCTGATCAACAGAGGNTAA
TCTTTGCCGGCAAACAAACTGAAGATGGTCGTACTCTTGCTGACTACACA
TNCAGAAGGAGTCAACCTNNCATTTGTGCTCGTCTCCGTGGTGCATGCAG
ATCTTNGGAAAACCTCACCGAAAACAATACTCCTGAGGTGAAAGTCTGAC
CCTTGACACGTGAAGCAAAAATCAGACAGG