EY649818 | Citrus Genome Database

Overview


Name	EY649818
Unique Name	EY649818
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	930

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.940e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.839e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.51 bits (358), Expect = 3.250e-33
Identity = 70/76 (92.11%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 106.686 bits (265), Expect = 1.976e-22
Identity = 55/75 (73.33%), Postives = 62/75 (82.67%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITL+VE+SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 5.014e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 142.124 bits (357), Expect = 4.245e-33
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLR++GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 106.301 bits (264), Expect = 2.581e-22
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  R+RG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRG 75

HSP 4 Score: 102.064 bits (253), Expect = 4.868e-21
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.549e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.739 bits (356), Expect = 5.544e-33
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 105.916 bits (263), Expect = 3.371e-22
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITL+VE SDTI+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.553e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 7.241e-33
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 105.531 bits (262), Expect = 4.403e-22
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTI LEVE+SDTI+NV AKIQD EG PPDQQR IFAGKQ E+GRTLADY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.449 bits (254), Expect = 3.727e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.553e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 7.241e-33
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 105.531 bits (262), Expect = 4.403e-22
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SD+I+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.553e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 7.241e-33
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 105.531 bits (262), Expect = 4.403e-22
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SD+I+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.553e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 7.241e-33
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 105.531 bits (262), Expect = 4.403e-22
Identity = 55/75 (73.33%), Postives = 60/75 (80.00%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITLEVE SD I+NV AKIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY649818 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.489e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  165 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 392
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.813 bits (351), Expect = 2.107e-32
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  393 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQNESTLHLVLRLKGG 620
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ ESTLHLVLRL+GG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 103.99 bits (258), Expect = 1.281e-21
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 3

Query:  621 MQIFVKTLTGKTITLEVESSDTIDNVNAKIQDMEGXPPDQQRXIFAGKQTEDGRTLADYTXRR-SQPXICARLRG 842
            MQIFVKTLTGKTITL+VE SD+IDNV  KIQD EG PPDQQR IFAGKQ EDGRTL+DY  ++ S   +  RLRG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 75

HSP 4 Score: 100.908 bits (250), Expect = 1.085e-20
Identity = 49/51 (96.08%), Postives = 50/51 (98.04%), Query Frame = 3

Query:   12 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 164
            VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   26 VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY649818 vs. ExPASy Swiss-Prot

BLAST of EY649818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_CAMDR	2.940e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	2.940e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	3.839e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	5.014e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	6.549e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	8.553e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	8.553e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	8.553e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	8.553e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	2.489e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-003-H04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649818 ID=EY649818; Name=EY649818; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGGTAAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCA
GATCAGCAGAGGCTTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCAC
ACTTGCTGACTATAATATCCAGAAGGAATCAACCCTCCACTTGGTCCTTC
GACTTAGGGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACG
ATTACTCTTGAGGTGGAAAGCTCCGACACCATTGACAATGTGAAAGCCAA
GATTCAAGACAAGGAAGGGATCCCACCAGACCAACAGAGACTTATCTTTG
CCGGTAAACAGCTCGAGGATGGTCGCACACTTGCTGATTATAACATCCAG
AAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTATGCAGAT
CTTTGTAAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCT
CCGACACCATTGACAATGTCAAAGCCAAAATTCAGGATAAGGAAGGGATC
CCACCAGACCAGCAAAGGCTCATCTTTGCTGGTAAACAACTAGAGGATGG
ACGCACACTTGCAGACTACAACATCCAGAATGAATCAACCCTTCATTTGG
TCCTCCGTCTCAAGGGTGGCATGCAGATTTTTGTGAAAACCCTGACCGGT
AAGACTATAACTTTGGAGGTTGAAAGCTCTGACACGATCGACAATGTCAA
TGCCAAGATCCAGGACATGGAGGGCATNCCACCTGATCAACAGAGGNTAA
TCTTTGCCGGCAAACAAACTGAAGATGGTCGTACTCTTGCTGACTACACA
TNCAGAAGGAGTCAACCTNNCATTTGTGCTCGTCTCCGTGGTGCATGCAG
ATCTTNGGAAAACCTCACCGAAAACAATACTCCTGAGGTGAAAGTCTGAC
CCTTGACACGTGAAGCAAAAATCAGACAGG