EY649803

Overview
NameEY649803
Unique NameEY649803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649803 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.089e-11
Identity = 57/246 (23.17%), Postives = 102/246 (41.46%), Query Frame = 2
Query:  119 LGLPLIPAYSEASG-AQVLHGVNYASAAAGILDITGRNFVGRIPFDQ--QIRNFQNTLDQVTDNLGASDV-------SNAIARCIFFVGMGSNDYLNNYLMPNYNTKNQYNAQQYADLLVSEYSRQLTTLYNLGARKFVLAGLGRMGCIP---SILAQNQMDR--CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGQTGANYMSSIPNTCANR 811
            L   L+  Y ++ G  +  +G N+A A +  L          +PF    Q++ F +   +  +   +S+        +N     ++ + +G ND   ++   N  ++      Q    +++E    +  LY+ G R+F +   G +GC+P   S++    +D+  C    N     FN  +  M   L   L  A   +IDI  +   L+ N   YGF      CCG G T  NY  ++  TC ++
Sbjct:   92 LNTSLLRPYLDSLGRTRFQNGANFAIAGSPTLP-------KNVPFSLNIQVKQFSHFKSRSLELASSSNSLKGMFISNNGFKNALYMIDIGQNDIARSFARGNSYSQTVKLIPQ----IITEIKSSIKRLYDEGGRRFWIHNTGPLGCLPQKLSMVKSKDLDQHGCLVSYNSAATLFNQGLDHMCEELRTELRDATIIYIDIYAIKYSLIANSNQYGFKSPLMACCGYGGTPYNY--NVKITCGHK 324          
BLAST of EY649803 vs. ExPASy Swiss-Prot
Match: GDL57_ARATH (GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.952e-11
Identity = 57/245 (23.27%), Postives = 105/245 (42.86%), Query Frame = 2
Query:  110 AELLGLPLIPAY-----SEASG-AQVLHGVNYASAAAGILD--ITGRNFVGRIPFDQQIRNFQNTLDQVTDNLGASDVSNAIARCIFFVG-MGSNDYLNNYLMPNYNTKNQYNAQQYADLLVSEYSRQLTTLYNLGARKFVLAGLGRMGCIP---SILAQNQMDR--CSEEVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGQTGANYMSSIPNTC 802
            AE + LP +P Y     + A+G A   HGVN+A + + ++      +N +      Q I       ++  + LG +   +     +F++G +G NDY        Y   +  ++    +L +S ++R L TL N G +  ++ G    GC+    S+ A++  D   C +  N      N  +++ +  L    P A   + D    +  ++ +   YG +   + CCGIG+    Y   +  TC
Sbjct:   92 AESMNLPFLPPYLSLKTTNANGTATDTHGVNFAVSGSTVIKHAFFVKNNLSLDMTPQSIETELAWFEKYLETLGTNQKVSLFKDSLFWIGEIGVNDYA-------YTLGSTVSSDTIRELSISTFTRFLETLLNKGVKYMLVQGHPATGCLTLAMSLAAEDDRDSLGCVQSANNQSYTHNLALQSKLKQLRIKYPSATIVYADYWNAYRAVIKHPSKYGITEKFKACCGIGEP---YNFQVFQTC 326          
The following BLAST results are available for this feature:
BLAST of EY649803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
LIP4_ARATH6.089e-1123.17GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL57_ARATH7.952e-1123.27GDSL esterase/lipase At3g48460 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-F12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649803 ID=EY649803; Name=EY649803; organism=Citrus sinensis; type=EST; length=940bp
AATTATTAATTGTATCAAATAATATATCATTTTGCCCATTAGCTTTTATT
TACTCTTCACAAATATTTTTAATGTCATATTAACCAAATTTTGTAAATGC
ATCCATTCAGCTGAACTACTGGGACTTCCTCTGATTCCTGCATACTCTGA
AGCTTCCGGTGCACAAGTGCTTCACGGAGTCAACTATGCTTCTGCCGCTG
CTGGAATCCTCGACATCACCGGAAGAAACTTCGTAGGTCGCATACCGTTT
GATCAACAAATAAGGAATTTTCAGAACACACTTGATCAGGTCACTGATAA
TCTTGGAGCAAGTGATGTATCAAATGCAATTGCAAGATGTATATTTTTTG
TAGGAATGGGCAGCAATGACTACCTAAACAATTATCTCATGCCCAATTAC
AATACCAAAAATCAATACAATGCTCAGCAATATGCTGATCTTTTGGTTTC
AGAATACTCAAGACAACTCACTACCCTTTACAATTTGGGAGCAAGGAAAT
TTGTGTTGGCCGGGTTAGGAAGAATGGGATGTATTCCAAGCATTTTGGCT
CAAAATCAAATGGATCGCTGTTCAGAAGAAGTGAATCAACTTGTTATGCC
TTTTAATGCAAATGTGAAGACTATGATTAACAATCTTAATGCCAATCTTC
CTGGTGCAAGATTCACCTTCATTGACATTGCCCGCATGTTTGAAGATCTN
CTCACCAATTATAGATCATACGGATTCAGTGTAATAGATCGAGGGTGCTG
TGGCATTGGACAAACGGGAGCCAATTACATGTCTTCCATTCCAAACACAT
GTGCAAATCGAGAACATACGTTTTCTGGGATGCANTTCACCCACAGAAGC
TGTGACATTATGTTTGGAAGAAAAGCTTCTATGTGACCAGNAGCGTGTTT
TTCCATGACATNCAGCAGCTGGCAGTCTTTAACTAGGAAT
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