EY649790

Overview
NameEY649790
Unique NameEY649790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649790 vs. ExPASy Swiss-Prot
Match: GL8D2_MOUSE (Glycosyltransferase 8 domain-containing protein 2 OS=Mus musculus GN=Glt8d2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 54/198 (27.27%), Postives = 85/198 (42.93%), Query Frame = 3
Query:  210 PSCLSLMNHLRIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGAVVGSLCGDNC-CP*RK-----------YKDYLNFSYPIISS-NFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGLELWQPG---ALPPAMLALDGNVHPIDPSWHVAELR-QRSLEAHEETLKSAAVLHFSGPAKPW 752
            P  L  +N +R Y+P L     K+++LDDDV+VQ D+  L +  L      A       D+C  P  +           Y  YL++    I         C++  G+ V ++  W+   IT    KW++ N++  L     G   A  P ++   G    I+P WH+  L         E  L+ A +LH++G  KPW
Sbjct:  129 PELLQPLNFVRFYLPLLVHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAF-----SDDCDLPSAQDIHRLVGLQNTYMGYLDYRKKTIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSTINPLWHIRHLGWNPDARYSEHFLQEAKLLHWNGRHKPW 321          
BLAST of EY649790 vs. ExPASy Swiss-Prot
Match: GL8D1_DANRE (Glycosyltransferase 8 domain-containing protein 1 OS=Danio rerio GN=glt8d1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12
Identity = 53/189 (28.04%), Postives = 81/189 (42.86%), Query Frame = 3
Query:  240 RIYIPELFPDLNKILFLDDDVVVQHDLSSLLELDLNGKVVGA------------VVGSLCGDNCCP*RKYKDYLNFSYPIISS-NFDHDHCAWLYGMNVLDLEAWRRTNITATYHKWLKLNLKSGL---ELWQPGALPPAMLALDGNVHPIDPSWHVAELRQRSL--EAHEETLKSAAVLHFSGPAKPW 752
            R Y+P   PD  K ++LDDDV+VQ D+  L    L    V A            +V      N      Y  YL+F    I       + C++  G+ V +L  W++ N+T+    W++ N K  L    L      PP ++    +   IDP W+V  L           + +K+A +LH++G  KPW
Sbjct:  150 RFYMPAFLPDAEKAIYLDDDVIVQGDIRELFNTSLKSGHVAAFSEDCDSASSKGIVRGAGNQN-----SYIGYLDFKKEAIKKLGMRANTCSFNPGVFVANLTEWKQQNVTSQLEFWMERNAKEDLYSKTLADCMTTPPMLIVFYKHHSNIDPMWNVRHLGATGAGNRYSAQFVKAAKLLHWNGHYKPW 333          
The following BLAST results are available for this feature:
BLAST of EY649790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GL8D2_MOUSE1.366e-1227.27Glycosyltransferase 8 domain-containing protein 2 ... [more]
GL8D1_DANRE3.044e-1228.04Glycosyltransferase 8 domain-containing protein 1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-E09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649790 ID=EY649790; Name=EY649790; organism=Citrus sinensis; type=EST; length=902bp
TGCATTTATGGTTTGCAATCAATTCGTTTAGACCAGCGGTTGTGGAAGTT
AAGGGATTGCACCAATATGATTGGCCTCAGGAGGTGAATGTTGGAGTCAA
AGAGATGTTAGAGGCTCATCGTTTAATTTGGAGCCATTACTACAAGAATT
TGAAGCATGAAGACTTTGAATATGAGGGTGAGAATAGGAGATGTCTAGAG
GTTCTAAGCCCTAGCTGCCTATCTCTTATGAATCATCTCAGAATTTATAT
TCCCGAGCTGTTTCCAGATCTGAACAAGATACTGTTTCTGGACGATGATG
TAGTAGTACAACATGACTTGTCATCCCTGTTGGAACTGGATCTCAATGGG
AAAGTTGTTGGTGCTGTTGTTGGCTCATTATGTGGGGACAACTGTTGCCC
ATGAAGAAAATACAAGGATTACTTGAATTTCTCATACCCAATAATATCGT
CAAATTTTGATCATGATCATTGTGCTTGGCTTTATGGAATGAATGTGCTT
GATCTTGAAGCTTGGAGGAGGACAAACATCACGGCAACATACCATAAATG
GTTAAAACTTAACCTCAAATCTGGATTGGAATTATGGCAACCAGGAGCAC
TTCCACCAGCTATGCTTGCTTTGGATGGTAACGTGCATCCTATTGATCCT
TCATGGCACGTGGCTGAGTTACGTCAGAGATCCCTGGAAGCTCATGAAGA
AACATTGAAATCTGCTGCTGTTTTACATTTCAGTGGCCCTGCAAAGCCAT
GGCTTGAGATTGAGTTGCCAGATGTACGATGTTTATGGAGTGGACATGTA
ATGTCTCAGACAAGTCATTAGATATGTCGAATCGCGGATGAAGTGACAAA
ATTATCTACTTGCTACTTTCATTTGCGACAGAAAGACTACATGTGAGACA
GA
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