EY649695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB3_ORYSJ (Tubulin beta-3 chain OS=Oryza sativa subsp. japonica GN=TUBB3 PE=2 SV=2) HSP 1 Score: 343.199 bits (879), Expect = 1.215e-103 Identity = 161/192 (83.85%), Postives = 172/192 (89.58%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHGID TG Y G+S +QLER+NVY+NEASGGR+VPRAVLMDLEPGTMDS+R+GPYGQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192 HSP 2 Score: 55.8398 bits (133), Expect = 1.215e-103 Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKL P+ Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATPT 221
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB2_ARATH (Tubulin beta-2/beta-3 chain OS=Arabidopsis thaliana GN=TUBB2 PE=1 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 2.068e-103 Identity = 161/192 (83.85%), Postives = 169/192 (88.02%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEVVC EHGIDPTG Y G+S +QLER+NVY+NEAS GR VPRAVLMDLEPGTMDSLR+GPYGQ FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192 HSP 2 Score: 58.9214 bits (141), Expect = 2.068e-103 Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKLT PS Sbjct: 193 VENADECMVLDNEALYDICFRTLKLTTPS 221
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB3_ELEIN (Tubulin beta-3 chain OS=Eleusine indica GN=TUBB3 PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 2.068e-103 Identity = 161/192 (83.85%), Postives = 170/192 (88.54%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHGID TG Y G+S +QLER+NVY+NEA GGR VPRAVLMDLEPGTMDSLR+GPYGQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEAGGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192 HSP 2 Score: 55.8398 bits (133), Expect = 2.068e-103 Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKL P+ Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATPT 221
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB7_ORYSJ (Tubulin beta-7 chain OS=Oryza sativa subsp. japonica GN=TUBB7 PE=2 SV=2) HSP 1 Score: 342.428 bits (877), Expect = 2.068e-103 Identity = 159/192 (82.81%), Postives = 172/192 (89.58%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHG+D TG Y G+S +QLER+NVY+NEASGGR+VPRAVLMDLEPGTMDS+R+GP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192 HSP 2 Score: 55.8398 bits (133), Expect = 2.068e-103 Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKL P+ Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATPT 221
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB4_WHEAT (Tubulin beta-4 chain OS=Triticum aestivum GN=TUBB4 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 2.068e-103 Identity = 160/192 (83.33%), Postives = 171/192 (89.06%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHGID TG Y G+S +QLER+NVY+NEASGGR VPRAVLMDLEPGTMDS+R+GP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGRYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192 HSP 2 Score: 56.9954 bits (136), Expect = 2.068e-103 Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKL PS Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATPS 221
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB4_ARATH (Tubulin beta-4 chain OS=Arabidopsis thaliana GN=TUBB4 PE=2 SV=2) HSP 1 Score: 340.117 bits (871), Expect = 2.068e-103 Identity = 161/192 (83.85%), Postives = 172/192 (89.58%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHGID TG YVG+S +QLER++VYFNEASGG++VPRAVLMDLEPGTMDSLR+GP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAEN DCLQGFQ+CH ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192 HSP 2 Score: 58.151 bits (139), Expect = 2.068e-103 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKL NP+ Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANPT 221
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB1_ARATH (Tubulin beta-1 chain OS=Arabidopsis thaliana GN=TUBB1 PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 3.521e-103 Identity = 159/193 (82.38%), Postives = 173/193 (89.64%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNS-QVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILH+Q GQCGNQIG KFWEV+CDEHG+DPTG Y G+S +QLER+NVY+NEASGGR+VPRAVLMDLEPGTMDS+R+GPYGQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQ+CH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193 HSP 2 Score: 57.3806 bits (137), Expect = 3.521e-103 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKL+ PS Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTPS 222
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB2_SOLTU (Tubulin beta-2 chain OS=Solanum tuberosum GN=TUBB2 PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 4.593e-103 Identity = 159/195 (81.54%), Postives = 171/195 (87.69%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGN---SQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHG+DPTG Y G S +QLER+NVYFNEASGGR+VPRAVLMDLEPGTMDS+R+GPYGQIFRPDN VFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQ+CH ISK+REEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNLVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 195 HSP 2 Score: 58.9214 bits (141), Expect = 4.593e-103 Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKLT PS Sbjct: 196 VENADECMVLDNEALYDICFRTLKLTTPS 224
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB1_SOLTU (Tubulin beta-1 chain OS=Solanum tuberosum GN=TUBB1 PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 4.593e-103 Identity = 159/195 (81.54%), Postives = 171/195 (87.69%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGN---SQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHG+DPTG Y G S +QLER+NVYFNEASGGR+VPRAVLMDLEPGTMDS+R+GPYGQIFRPDN VFGQ+GAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQ+CH ISK+REEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNLVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 195 HSP 2 Score: 58.9214 bits (141), Expect = 4.593e-103 Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKLT PS Sbjct: 196 VENADECMVLDNEALYDICFRTLKLTTPS 224
BLAST of EY649695 vs. ExPASy Swiss-Prot
Match: TBB7_MAIZE (Tubulin beta-7 chain OS=Zea mays GN=TUBB7 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 4.594e-103 Identity = 160/192 (83.33%), Postives = 171/192 (89.06%), Query Frame = 2 Query: 50 MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSQVQLERVNVYFNEASGGRHVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 625 MREILHIQ GQCGNQIG KFWEV+CDEHGID TG Y G+S +QLER+NVY+NEASGGR VPRAVLMDLEPGTMDS+R+GP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQL Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192 HSP 2 Score: 55.8398 bits (133), Expect = 4.594e-103 Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 3 Query: 627 VENADECMVPDNEALYDICFRTLKLTNPS 713 VENADECMV DNEALYDICFRTLKL P+ Sbjct: 193 VENADECMVLDNEALYDICFRTLKLATPT 221 The following BLAST results are available for this feature:
BLAST of EY649695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649695 ID=EY649695; Name=EY649695; organism=Citrus sinensis; type=EST; length=940bpback to top |