EY702809

Overview
NameEY702809
Unique NameEY702809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702809 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 43/116 (37.07%), Postives = 58/116 (50.00%), Query Frame = 3
Query:  534 GLPACRSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKYTVRNXXXXXXXXXXXXHPHLVCLLGHCIDGXGRDAYTVKISLLVYEFMSHGNFRTHLSE 878
            G  A  +F   EL  AT NF     +GEG +G++YKGRL++ G  VA++ L  +     R             HP+LV L+G+C DG  R        LLVYEFM  G+   HL +
Sbjct:   67 GQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQR--------LLVYEFMPLGSLEDHLHD 174          
BLAST of EY702809 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 3
Query:  555 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNXXXXXXXXXXXXHPHLVCLLGHCIDGXGRDAYTVKISLLVYEFMSHGNFRTHL 872
            FTL +L+ ATN F    ++GEG YG +Y+G+L NGT VA++ L ++     +             H +LV LLG+CI+G  R        +LVYE+++ GN    L
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHR--------MLVYEYVNSGNLEQWL 268          
BLAST of EY702809 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11
Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 3
Query:  555 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNXXXXXXXXXXXXHPHLVCLLGHCIDGXGRDAYTVKISLLVYEFMSHGNFRTHL 872
            F+ EEL+EATNNFD S  +G+G +G +Y G+L++G SVA++ L  +                   HP+LV L G C     RD       LLVYE++++G    HL
Sbjct:  332 FSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFG-CSSKQSRDL------LLVYEYVANGTLADHL 430          
BLAST of EY702809 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 3
Query:  552 SFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNXXXXXXXXXXXXHPHLVCLLGHCIDGXGRDAYTVKISLLVYEFMSHGN 857
            SF+L ++K ATNNFD +  +GEG +G +YKG+L +GT +A++ L +  K   R             HP+LV L G C++G           LLVYEF+ + +
Sbjct:  611 SFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQ--------LLLVYEFVENNS 704          
BLAST of EY702809 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 3
Query:  549 RSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKYTVRNXXXXXXXXXXXXHPHLVCLLGHCIDGXGRDAYTVKISLLVYEFMSHGNFRTHL 872
            ++FT +EL EAT NF     +GEG +GK++KG +E     VAI+ L  +    +R             HP+LV L+G C +G  R        LLVYE+M  G+   HL
Sbjct:   89 QTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQR--------LLVYEYMPQGSLEDHL 189          
BLAST of EY702809 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 3
Query:  507 SEAAKLGSEGLPACRSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNXXXXXXXXXXXXHPHLVCLLGHCIDGXGRDAYTVKISLLVYEFMSHGNFRTHLS 875
            S  A L  EG+   +SFT  EL  AT+NF+ S  +G+G YGK+YKG L +GT VAI+          +             H +LV LLG C D  G         +LVYE+M +G  R ++S
Sbjct:  600 SSKASLKIEGV---KSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFC-DEEGE-------QMLVYEYMENGTLRDNIS 711          
The following BLAST results are available for this feature:
BLAST of EY702809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
PBS1_ARATH1.461e-1137.07Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y2296_ARATH1.909e-1136.79Probable receptor-like protein kinase At2g42960 OS... [more]
Y1839_ARATH2.493e-1137.74Probable serine/threonine-protein kinase At1g18390... [more]
Y1534_ARATH3.256e-1137.25Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH4.252e-1136.70Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1684_ARATH5.553e-1137.40Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-E05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702809 ID=EY702809; Name=EY702809; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGCAACTAGATATGTCATTCAATGCATTAAGAGGAATGCCT
CCTCCTGCAATCTTCTCATTGCCAAATATCAGTGATTTGAATTTGGCATC
AAATATGTTCAGTGGGACACTTCCGAAAAATCTAAATTGTGGAGGCAAAC
TTGTTTTTTTTGATATATCTAATAATAAATTGACAGGAGGTTTGCCTTCT
TGTTTGAGCAACGAATCAGACAAAAGAGTTGTTAAATTCAGGGGAAATTG
CTTATCCTCTAATGTACAGAACCAGCATCCAGAATCATATTGCTTCGAAG
TCCGCACAGAGAGGAACCAAGCTGGGAGCAAAAATGTTGGAAAACTAGTT
GGTATTATTGTCGGTGTACTTGTTATAATGGTGCTCCTGGCTTTTGGATT
TCTCGTTGCATGTAGAAGATATTGCCCTCGAGGTACATCAGAGCAGCATT
TACTGCATAAATCTACAGGGTTCTCCTCTGAGGTCTTGACAAATGCAAGG
TATGTTTCTGAAGCAGCAAAGTTGGGTTCAGAAGGCCTCCCAGCTTGCCG
GTCATTTACTTTAGAGGAGTTGAAAGAAGCTACAAACAACTTTGATATGT
CTGCAATTATGGGAGAGGGTTCATATGGAAAGCTTTACAAAGGAAGATTA
GAGAATGGGACCTCAGTTGCCATAAGATGCTTACCTTCATCAAAGAAATA
TACAGTTCGAAATCTTAAACTCAGGCTGGATTTGCTAGCAAAGCTTCGCC
ATCCACATTTGGTTTGCCTTTTGGGGCACTGTATTGATGGANGAGGACGA
GATGCTTACACTGTGAAAATAAGTCTTCTCGTATATGAATTCATGTCCCA
TGGCAACTTTCGTACTCATCTCTCTGAGAACACT
back to top