EY649646

Overview
NameEY649646
Unique NameEY649646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 1.716e-34
Identity = 76/153 (49.67%), Postives = 101/153 (66.01%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYAERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRG+V+LKRIENKI+RQVTF+KRR G LKKA+E+S+LCDAEVA+IIFS +G+LFE+S+ SCM K LERY    Y  +   AP+ E       E   LK +++ LQ  Q                 R+ LGEDL  LS+K+++QLE Q++ +L
Sbjct:    1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQ---EYLKLKTRVEFLQTTQ-----------------RNILGEDLGPLSMKELEQLENQIEVSL 133          

HSP 2 Score: 29.6462 bits (65), Expect = 1.716e-34
Identity = 13/38 (34.21%), Postives = 26/38 (68.42%), Query Frame = 1
Query:  640 QHIRSRKNQLMPESISELQKKEKSIEEPXHLLVKQIKE 753
            + IRSRKNQ + + + +L+ KE+ +++    L K+++E
Sbjct:  134 KQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQE 171          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.856e-33
Identity = 78/154 (50.65%), Postives = 101/154 (65.58%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYAERQLIAPDP-ESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRG+V+LKRIENKI+RQVTF+KRR G LKKA+E+SVLCDAEVA+IIFS +G+LFE+ST SCM K LERY    Y      A    E++ +   E   LK +++ LQ  Q                 R+ LGEDL  LSLK+++QLE Q++ +L
Sbjct:    1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQ-----------------RNLLGEDLVPLSLKELEQLENQIEISL 137          

HSP 2 Score: 30.0314 bits (66), Expect = 1.856e-33
Identity = 13/37 (35.14%), Postives = 26/37 (70.27%), Query Frame = 1
Query:  643 HIRSRKNQLMPESISELQKKEKSIEEPXHLLVKQIKE 753
            +IRS KNQ + + + EL++KE+ +++    L ++I+E
Sbjct:  139 NIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 175          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.856e-33
Identity = 78/154 (50.65%), Postives = 101/154 (65.58%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYAERQLIAPDP-ESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRG+V+LKRIENKI+RQVTF+KRR G LKKA+E+SVLCDAEVA+IIFS +G+LFE+ST SCM K LERY    Y      A    E++ +   E   LK +++ LQ  Q                 R+ LGEDL  LSLK+++QLE Q++ +L
Sbjct:    1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQ-----------------RNLLGEDLVPLSLKELEQLENQIEISL 137          

HSP 2 Score: 30.0314 bits (66), Expect = 1.856e-33
Identity = 13/37 (35.14%), Postives = 26/37 (70.27%), Query Frame = 1
Query:  643 HIRSRKNQLMPESISELQKKEKSIEEPXHLLVKQIKE 753
            +IRS KNQ + + + EL++KE+ +++    L ++I+E
Sbjct:  139 NIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 175          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.144e-33
Identity = 78/159 (49.06%), Postives = 104/159 (65.41%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYAERQLIAPDPESQRNWPLECNN------LKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRGRV+LKRIENKINRQVTF+KRR G LKKA+E+SVLCDAEVA+IIFS++GKL+E+ + S M K LERY++  Y      AP+        LE ++      LKA+ + LQ++Q                 R+ LGEDL  L+ K+++ LE+QLD +L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYG-----APETNISTREALEISSQQEYLKLKARYEALQRSQ-----------------RNLLGEDLGPLNSKELESLERQLDMSL 137          

HSP 2 Score: 30.4166 bits (67), Expect = 3.144e-33
Identity = 13/38 (34.21%), Postives = 24/38 (63.16%), Query Frame = 1
Query:  640 QHIRSRKNQLMPESISELQKKEKSIEEPXHLLVKQIKE 753
            + IRS + QLM + + +LQ+KE ++ E    L +++ E
Sbjct:  138 KQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLME 175          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.536e-32
Identity = 77/159 (48.43%), Postives = 103/159 (64.78%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYAERQLIAPDPESQRNWPLECNN------LKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRGRV+LKRIE KINRQVTF+KRR G LKKA+E+SVLCDAEVA+IIFS++GKL+E+ + S M K LERY++  Y      AP+P       LE ++      LK + + LQ++Q                 R+ LGEDL  L+ K+++ LE+QLD +L
Sbjct:    1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYG-----APEPNISTREALEISSQQEYLKLKGRYEALQRSQ-----------------RNLLGEDLGPLNSKELESLERQLDMSL 137          

HSP 2 Score: 28.8758 bits (63), Expect = 1.536e-32
Identity = 12/38 (31.58%), Postives = 24/38 (63.16%), Query Frame = 1
Query:  640 QHIRSRKNQLMPESISELQKKEKSIEEPXHLLVKQIKE 753
            + IRS + QLM + +++ Q+KE ++ E    L +++ E
Sbjct:  138 KQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLME 175          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.327e-32
Identity = 79/162 (48.77%), Postives = 110/162 (67.90%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYA---------ERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRGRV+LKRIENKINRQVTF+KRR G LKKA+E+SVLCDAEVA+IIFS++GKL+E+ +   M + LERY++++Y          E +L+    +S RN   E   LKA+++ LQ+ Q                 R+ LGEDL +L +K+++QLE+QLD++L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELV----QSSRN---EYLKLKARVENLQRTQ-----------------RNLLGEDLGTLGIKELEQLEKQLDSSL 138          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 4.416e-32
Identity = 77/166 (46.39%), Postives = 112/166 (67.47%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERYAYAE--RQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTALNT--SDQEKI 664
            MGRG+VQ++RIEN+++RQVTFSKRR G LKKAHEI+VLCD +VA I+FS KG LF Y S+ + ME+ILE+Y+R+        +I   PE + +   +   L+ +I+ L+K+Q                 R+ +G++L+SL+L+DIQQLE Q+DT+LN   S +EK+
Sbjct:    1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQ-----------------RNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKL 149          

HSP 2 Score: 23.0978 bits (48), Expect = 4.416e-32
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:  643 HIRSRKNQLMPESISELQKKEKSIE 717
            +IRSRK +L+ E  + L+KK   +E
Sbjct:  141 NIRSRKEKLLMEKNTILEKKITELE 165          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.649e-31
Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAY-------AERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRGRV+LKR+ENKINRQVTF+KRR G LKKA+E+SVLCDAEVA+I+FS++GKL+E+ + S M K LERY++  Y         ++ +  +  SQ+    E   LKA+ + LQ++Q                 R+ +GEDL  LS KD++ LE+QLD++L
Sbjct:    1 MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQ----EYLKLKARYESLQRSQ-----------------RNLMGEDLGPLSSKDLETLERQLDSSL 139          

HSP 2 Score: 24.2534 bits (51), Expect = 3.649e-31
Identity = 11/37 (29.73%), Postives = 22/37 (59.46%), Query Frame = 1
Query:  640 QHIRSRKNQLMPESISELQKKEKSIEEPXHLLVKQIK 750
            + IRS + Q M + + +LQ+KE  + E    L ++++
Sbjct:  140 KQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRME 176          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.804e-31
Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYA-------ERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTAL 640
            MGRGRV+LKRIENKINRQVTF+KRR G LKKA+E+SVLCDAEVA+IIFS++GKL+E+ + S M + LERY++  Y         R+ +A +  SQ+    E   LK + D LQ+ Q                 R+ LGEDL  LS K+++ LE+QLD++L
Sbjct:    1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQ----EYLKLKERYDALQRTQ-----------------RNLLGEDLGPLSTKELESLERQLDSSL 139          
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.064e-31
Identity = 70/153 (45.75%), Postives = 97/153 (63.40%), Query Frame = 2
Query:  182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYST-DSCMEKILERYERYAYAERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTA 637
            MGRG++++KRIEN  NRQVTFSKRR G LKKAHE+SVLCDAE+ +IIFS  GKLFEYS+  S M+KI+ERY++ + A       + ++Q  +  E   +K + + LQ N                  R  +GEDL SL++ ++  L QQL++A
Sbjct:    1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGAR----ITEYDNQHLY-CEMTRMKNENEKLQTN-----------------IRRMMGEDLTSLTMTELHHLGQQLESA 131          

HSP 2 Score: 36.1946 bits (82), Expect = 8.064e-31
Identity = 16/43 (37.21%), Postives = 28/43 (65.12%), Query Frame = 1
Query:  637 SQHIRSRKNQLMPESISELQKKEKSIEEPXHLLVKQIKEREKA 765
            S  +RSRKNQLM + +  L++KE+ +E+    L + + E++ A
Sbjct:  132 SSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQAA 174          
The following BLAST results are available for this feature:
BLAST of EY649646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
MADS1_ORYSI1.716e-3449.67MADS-box transcription factor 1 OS=Oryza sativa su... [more]
MADS5_ORYSJ1.856e-3350.65MADS-box transcription factor 5 OS=Oryza sativa su... [more]
MADS5_ORYSI1.856e-3350.65MADS-box transcription factor 5 OS=Oryza sativa su... [more]
AGL9_PETHY3.144e-3349.06Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
AGL9_SOLLC1.536e-3248.43Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
MADS8_ORYSJ3.327e-3248.77MADS-box transcription factor 8 OS=Oryza sativa su... [more]
MAD20_ORYSJ4.416e-3246.39MADS-box transcription factor 20 OS=Oryza sativa s... [more]
MTF1_PEA3.649e-3147.50MADS-box transcription factor 1 OS=Pisum sativum G... [more]
SEP3_ARATH4.804e-3149.38Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
GGM13_GNEGN8.064e-3145.75MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-H09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649646 ID=EY649646; Name=EY649646; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGANAAGAAGAAATCCTTTTATGAGATATTAGATTTGGGTT
TCTGTTTTTGGAGGGGCTTTGGTTGTTGGGTTTCTTTGGGGGAAAGAGAA
AAAAAAAAGAATAGAAATTATCAAATAATCTGTGTGAGACAGAGAGAGAG
TGAGACAGATCATACAGAAGAATTCATAACAATGGGAAGAGGTAGGGTTC
AGCTGAAGAGAATAGAGAACAAGATCAATCGCCAAGTTACCTTTTCCAAA
CGGAGAGCTGGCTTCTTGAAGAAAGCTCATGAGATCTCTGTGTTATGTGA
TGCTGAAGTTGCTGTTATTATCTTCTCTCACAAAGGGAAGCTCTTTGAAT
ACTCCACTGACTCTTGCATGGAAAAGATACTGGAACGCTATGAGAGGTAC
GCCTATGCTGAGAGACAGCTGATTGCCCCTGATCCTGAATCACAGCGTAA
CTGGCCCCTGGAGTGCAACAACCTTAAGGCTAAGATAGATCTTCTGCAGA
AAAACCAAAGATGTTCTTCCAAAAGTACATTCTACACTGGTTCTCAAATT
GACCTCTTCAGGCACTATTTGGGAGAAGATTTAGAGTCTCTGTCCCTCAA
AGACATCCAACAGTTGGAGCAACAGCTGGACACCGCTCTCAACACATCAG
ATCAAGAAAAAATCAACTCATGCCAGAGTCCATCTCTGAGCTTCAGAAAA
AAGAAAAGTCTATAGAGGAGCCANNACACTTGCTGGTAAAGCAGATTAAG
GAGAGAGAGAAGGCTGCAGCGCACAAGCTCAGTGGGGGGATCAAATNCAA
AACCAGTTCCCACACATTATTCTTCTACTTNCCAGCCACTNNCTGCTTAG
ACTGGGCGGTGCCTACCAGACAGGCATCGA
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