EY649646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.315e-17 Identity = 54/160 (33.75%), Postives = 93/160 (58.13%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYAERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTALNTSDQEK 661 MGR ++++KRIENK +RQVTFSKRR G ++KA ++SVLCDA VA+++ S GKL+ +S+ + KIL+RY + ++LKA L + + + Y ++ + +G +++++S+ + QLE+ L+TAL+ + +K Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQ--------------------HADDLKA----LDHQSKALNYGSHYELLEL-VDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKK 135
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.157e-17 Identity = 52/160 (32.50%), Postives = 92/160 (57.50%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEKILERYERYAYAERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTALNTSDQEK 661 MGR +V++KRIENK +RQVTFSKRR G ++KA ++S+LC++ +AV++ S GKL++ ++ M KI++RYE + E + + +++ P LK ++++Q S ++++ S+ + LE+QL+TAL+ + K Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHADELEALDLAEKTRNYLP-----LKELLEIVQSKLEES--------------------NVDNASVDTLISLEEQLETALSVTRARK 135
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-16 Identity = 42/74 (56.76%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERY 400 MGR ++Q++RI ++ NRQVTF+KR+ G +KKA+E+SVLCD E+A+IIF+H KLF+Y STD M+K+L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-16 Identity = 42/74 (56.76%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERY 400 MGR ++Q++RI ++ NRQVTF+KR+ G +KKA+E+SVLCD E+A+IIF+H KLF+Y STD M+K+L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-16 Identity = 42/74 (56.76%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERY 400 MGR ++Q++RI ++ NRQVTF+KR+ G +KKA+E+SVLCD E+A+IIF+H KLF+Y STD M+K+L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-16 Identity = 42/74 (56.76%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERY 400 MGR ++Q++RI ++ NRQVTF+KR+ G +KKA+E+SVLCD E+A+IIF+H KLF+Y STD M+K+L +Y Y Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYSTDSCMEK-ILERYERYAYAERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTALNTSDQEK 661 M RG++Q+KRIEN+ NRQVT+SKRR G KKA+E++VLCDA+V++I+ S GKL E+ + S K + + Y++ + W ++ ++ L++ R K R +GE L L+ + +++L + +D +L + K Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDL------------WNSHYEKMQEQLRKLKEVNRNLRKE----------IRQRMGESLNDLNYEQLEELMENVDNSLKLIRERK 139
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16 Identity = 56/161 (34.78%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERYAYAERQLIAPDPESQRNWPLECNNLKAKIDLLQKNQRCSSKSTFYTGSQIDLFRHYLGEDLESLSLKDIQQLEQQLDTALNTSDQEK 661 M RG++Q+KRIEN+ NRQVT+SKRR G KKAHE+SVLCDA+V++I+ S KL EY S + +++ ++Y++ + D S ++ +LK K++ + +N R R +GE L L + I L + +D +L + K Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQK-------AVGVDLWSSHYEKMQ-EHLK-KLNEVNRNLRRE-------------IRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERK 139
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MEF2A_XENLA (Myocyte-specific enhancer factor 2A homolog OS=Xenopus laevis GN=mef2a PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.830e-15 Identity = 41/74 (55.41%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERY 400 MGR ++Q+ RI ++ NRQVTF+KR+ G +KKA+E+SVLCD E+A+IIF+ KLF+Y STD M+K+L +Y Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTD--MDKVLLKYTEY 72
BLAST of EY649646 vs. ExPASy Swiss-Prot
Match: MEF2A_RAT (Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.830e-15 Identity = 41/74 (55.41%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 182 MGRGRVQLKRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEY-STDSCMEKILERYERY 400 MGR ++Q+ RI ++ NRQVTF+KR+ G +KKA+E+SVLCD E+A+IIF+ KLF+Y STD M+K+L +Y Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTD--MDKVLLKYTEY 72 The following BLAST results are available for this feature:
BLAST of EY649646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649646 ID=EY649646; Name=EY649646; organism=Citrus sinensis; type=EST; length=880bpback to top |