EY649601

Overview
NameEY649601
Unique NameEY649601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649601 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.406e-13
Identity = 62/243 (25.51%), Postives = 102/243 (41.98%), Query Frame = 3
Query:   66 EEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS----VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY------------------KAIDGSCDT---------YRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTENGADYW 698
            +++ ++ +G   G KR+  + K   +    +G  +P S     +W     ++++++Q  CGSCWAF    +      I     + LS  ++V CD + N GC GG    A+ ++   G + +EE  PY                   +    C +           K AK+ + D       +DE  +Q+ V N PV          F  Y+SG++    G  L  H V  VG+GT NG DY+
Sbjct:   45 DQFDNIKVGQLLGFKRSPNRPKLQIKSYDPLGVQIPTSFNAQTNWPNCTTISQIQNQARCGSCWAFGATESATDRLCIHNNENVQLSFMDMVTCDETDN-GCEGGDAFSAWNWLRKQGAV-SEECLPYTIPTCPPAQQPCLNFVNTPSCTKECQSNSSLIYSQDKHKMAKIYSFD-------SDEAIMQEIVTNGPVEACFT-VFEDFLAYKSGVYVHTTGKDLGGHCVKLVGFGTLNGVDYY 277          

HSP 2 Score: 22.3274 bits (46), Expect = 3.406e-13
Identity = 10/29 (34.48%), Postives = 13/29 (44.83%), Query Frame = 2
Query:  707 NSWGXXWGEAGYIXMERNVAGTLTGKCGI 793
            N W   WG+ G   ++R       G CGI
Sbjct:  281 NQWTTSWGDNGTFLIKR-------GDCGI 302          
BLAST of EY649601 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.624e-12
Identity = 62/241 (25.73%), Postives = 104/241 (43.15%), Query Frame = 3
Query:  111 RTSLKSKRSNRYLPRVGEALPDSVD----WRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVT-GSL-ISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTE--------EDYPYKAIDGSC----------DTY-RKNAKVVTIDDYEDVPLNDEK--------------ALQK-AVANQPVSVAIEGGGMAFQLYESGIFT---GRCGTSLDHGVTAVGYGTENGADYWIV 704
            R S+K K+       +   +P+S D    W K  ++  ++DQ SCGSCWAF  + A+     I + G L ++LS  +L+ C  S   GCNGG    A+ + + +G +           + YP+   +             D Y     +   + DY D   +++K              A+QK  + + P+ +A E     F  Y+ G++    G+ G    H V  +G+G ++G  YW V
Sbjct:   86 RLSVKGKQHLSKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGDPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFE-VYEDFLNYDGGVYVHTGGKLGGG--HAVKLIGWGIDDGIPYWTV 323          

HSP 2 Score: 27.7202 bits (60), Expect = 1.624e-12
Identity = 16/43 (37.21%), Postives = 19/43 (44.19%), Query Frame = 2
Query:  707 NSWGXXWGEAGYIXMERNVAGTLTGKCGICHGASYPIKKAKIL 835
            NSW   WGE G+  + R V      +CGI  G    I K   L
Sbjct:  325 NSWNTDWGEDGFFRILRGV-----DECGIESGVVGGIPKLNSL 362          
The following BLAST results are available for this feature:
BLAST of EY649601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CTSB_DICDI3.406e-1325.51Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]
CPR6_CAEEL1.624e-1225.73Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-D09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649601 ID=EY649601; Name=EY649601; organism=Citrus sinensis; type=EST; length=905bp
ATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTT
GCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCACGCTT
TGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTATCTGC
CACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGA
GCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATT
TTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCC
TGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAAT
GAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGA
TAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATG
GTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGAC
TATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGC
AAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGT
TATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCAT
GGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGAT
TGTGAAAATTCATGGGGCANTANCTGGGGAGAGGCTGGCTATATTANGAT
GGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTTGCCATG
GAGCCTCATATCCCATAAAGAAAGCCAAAATCCTCCCACCCTGGACCGTC
CCCTCCATCTNCACAAAGCCTCTGCTGTGTGTGACAATTATTACTCTGCC
TGAGA
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