EY649559

Overview
NameEY649559
Unique NameEY649559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649559_ssr113 microsatellite EY649559_ssr113:113..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_NEUCR (Histone acetyltransferase type B subunit 2 OS=Neurospora crassa GN=hat-2 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.682e-18
Identity = 69/207 (33.33%), Postives = 102/207 (49.28%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVK-----PRVAAAE--HISQFNEEARS--PFVKKFK---TIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSXQDH 599
            +R +++ Y  WK   P LYD + +  L WP+L+ +W P ++    K+    RL L   T    PN L IA  E+ K     PR    E   I  +  +A S  P   +FK    I HPGEVN+ R  PQN  I+AT      VLI+D      +H++  +    P L L GH++   F L   P  E  +++G +DK+V+LW  + +
Sbjct:   23 QRLINEEYKIWKKNSPFLYDMMLSTALEWPTLTTQWFPDVKNPKDKSHTVHRLLLGTHTAEGKPNYLQIAEVEIPKMVELNPRDYDEERGEIGGYGSKASSGEPLCIRFKITQKIDHPGEVNKARYQPQNPDIIATLAVDGRVLIFD----RTKHSITPSGTPSPQLELIGHKEEG-FGLNWNPHEEGCLVTGSEDKTVLLWDLKTY 224          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_CRYNE (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans GN=HAT2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.682e-18
Identity = 59/205 (28.78%), Postives = 96/205 (46.83%), Query Frame = 3
Query:   27 RSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQA--TYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAA-----------EHISQFNEEARSPF-VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSXQDH 599
            ++++++Y  WK   P LYD +  H L WPSL+C+W P +     T    QRL +   T G   + L+IA  EV+ P+  A            E   +      SP  ++  +TI H GEVNR R +PQN +++AT T + +V ++D     ++       +  PD+ L G              E ++LS  +D ++  W  Q +
Sbjct:   23 QAINEQYKVWKKNTPFLYDTVITHALTWPSLTCQWLPDITDVPDTDYTSQRLIIGTHTSGQANDHLIIA--EVLLPKKGAGISDKALADLYDEEKQEIGSYTASPARIRAIQTINHAGEVNRARYMPQNPELIATKTVTGEVYVFDRTKHESKAPA--NGECKPDIRLKGQTKEGYGLSWNALKEGHILSASEDTTIGHWDIQGY 223          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: CAF1_DROME (Probable histone-binding protein Caf1 OS=Drosophila melanogaster GN=Caf1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.140e-17
Identity = 66/199 (33.17%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N L+IA+ ++  P   A    S ++ E +  F         ++    I H GEVNR R +PQN+ ++AT T S DVL++D    P++     + +  PDL L GHQ    + L+  P    Y+LS   D ++ LW
Sbjct:   18 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDE-QNHLLIASVQL--PSEDAQFDGSHYDNE-KGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP--SGECQPDLRLRGHQKEG-YGLSWNPNLNGYLLSASDDHTICLW 209          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_ASPOR (Histone acetyltransferase type B subunit 2 OS=Aspergillus oryzae GN=hat2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.489e-17
Identity = 62/204 (30.39%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE-----------ARSPFVKKF---KTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLW 584
            E+ +++ Y  WK   P LYD + +  L WP+L+ +W P  ++   K  +  RL L   T     N L IA+ ++  P   +A +   ++EE            ++P   KF   + I H GEVN+ R  PQN  ++AT      V+IWD     ++H  L     +P + L GH     F L+  P T  ++++G +DK+V LW
Sbjct:   22 EKVINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLLGTHTSSDAQNYLQIAHVQLPNP---SAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNVIATMCTDGRVMIWD----RSKHPSLPTGTVNPQMELLGHTKEG-FGLSWSPHTAGHLVTGSEDKTVRLW 217          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.944e-17
Identity = 65/196 (33.16%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++     + D  PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQI--PNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDP--SGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP4_XENTR (Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.944e-17
Identity = 67/198 (33.84%), Postives = 98/198 (49.49%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++     + + +PDL L GHQ    + L+  P     +LS   D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP--SGECNPDLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLW 205          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP4_PONAB (Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.539e-17
Identity = 66/198 (33.33%), Postives = 99/198 (50.00%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            ER +++ +  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++     + + +PDL L GHQ    + L+  P    ++LS   D ++ LW
Sbjct:   14 ERVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDP--SGECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLW 205          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.316e-17
Identity = 67/198 (33.84%), Postives = 98/198 (49.49%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++     + + +PDL L GHQ    + L+  P     +LS   D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDP--SGECNPDLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLW 205          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_XENLA (Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.331e-17
Identity = 65/196 (33.16%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  +V  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P++     + +  PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQV--PNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDP--SGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_CHICK (Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.657e-17
Identity = 64/193 (33.16%), Postives = 95/193 (49.22%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KFKTII---HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER + + Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  ++    +   +++ S+  E      V  K +T I   H GEVNR R +PQN  I+AT T S DVL++D    P++     + + +PDL L GHQ            + ++LS   D +V LW
Sbjct:   13 ERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDP--SGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLW 203          
The following BLAST results are available for this feature:
BLAST of EY649559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
HAT2_NEUCR6.682e-1833.33Histone acetyltransferase type B subunit 2 OS=Neur... [more]
HAT2_CRYNE6.682e-1828.78Histone acetyltransferase type B subunit 2 OS=Cryp... [more]
CAF1_DROME1.140e-1733.17Probable histone-binding protein Caf1 OS=Drosophil... [more]
HAT2_ASPOR1.489e-1730.39Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
RBBP7_XENTR1.944e-1733.16Histone-binding protein RBBP7 OS=Xenopus tropicali... [more]
RBBP4_XENTR1.944e-1733.84Histone-binding protein RBBP4 OS=Xenopus tropicali... [more]
RBBP4_PONAB2.539e-1733.33Histone-binding protein RBBP4 OS=Pongo abelii GN=R... [more]
RBP4B_XENLA3.316e-1733.84Histone-binding protein RBBP4-B OS=Xenopus laevis ... [more]
RBBP7_XENLA4.331e-1733.16Histone-binding protein RBBP7 OS=Xenopus laevis GN... [more]
RBBP7_CHICK5.657e-1733.16Histone-binding protein RBBP7 OS=Gallus gallus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649559 ID=EY649559; Name=EY649559; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACA
CAATGGAAGTCCTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAA
CCTCGTTTGGCCCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAG
CTACATACAAGAATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGC
AGTGTTCCAAATACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCG
AGTTGCAGCTGCAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCAC
CCTTTGTAAAGAAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGA
ATAAGAGAACTCCCACAGAACAGTAAAATAGTAGCCACACACACTGATAG
TCCTGATGTCCTCATTTGGGATGTTGAGGCACAACCTAATCGCCATGCTG
TCTTATGAGCTGCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAA
GATAATGCTGAATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCT
CTCTGGAGGCAAGGATAAGTCAGTGGTTTTATGGAGCATNCAAGACCATG
TCTCGGCTTTGGCAGCAGAACCAGGTTCTGCAAAATCTACAGCTTCTGGC
GGTGCCAACTCTAAAAAATGCTNCAGAGTGGTGGGAATGGGTGATAACCT
CTANAGAGCCCTTCTTTGGGGCACGATGTAAATACCTAGGNCATGAAGAC
ACTNGTGAAGACGTTCAGTNCTGTCCCATCAAGTGCACAGAGTNCTGCAN
TGTAGGTGATGATTCNTGCCTATACTATGGGATGGCAGATCTGGCTCTAC
TTCAGCTGTCAAGTTTGAAAAANCCATAATGCTGATATTCATGGGGTGAT
GGAATCCCCATGATGTGATCTAATAGGACGGGGGATTAT
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