EY649559

Overview
NameEY649559
Unique NameEY649559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649559_ssr113 microsatellite EY649559_ssr113:113..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 7.388e-17
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T + DVL++D    P++     + +  PDL L GHQ    + L+  P     +LS   D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDP--SGECTPDLRLRGHQKEG-YGLSWNPNLRSCLLSASDDHTICLW 205          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_CANGA (Histone acetyltransferase type B subunit 2 OS=Candida glabrata GN=HAT2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.388e-17
Identity = 60/189 (31.75%), Postives = 89/189 (47.09%), Query Frame = 3
Query:   30 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEV---VKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPY-VLSGGKDKSVVLW 584
            +VD+ Y  WKS VP+LYD+++   L WP+L+  W PQ      + RQ+L L   T G   N L I   ++   V         I + +E+     VK  K   H GE+ R R +PQ+  I+AT      + I+D  ++    A+L          L  H +N  + LA    E Y +LSG  D ++ LW
Sbjct:   29 TVDEEYELWKSNVPMLYDFVSETRLTWPTLTVEWLPQKNLVAARTRQQLILGTHTSGEEQNYLKIGAVDLPVEVTENSKKDREIDEEDEDMVLSNVKIVKKFPHDGEITRARYMPQDDNIIATINGEGKIFIYD-RSKNGVEALL--------STLEYHTENG-YGLAFNANEKYSLLSGSDDSNIALW 207          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_ASPFU (Histone acetyltransferase type B subunit 2 OS=Aspergillus fumigatus GN=hat2 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.260e-16
Identity = 60/204 (29.41%), Postives = 97/204 (47.55%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE-----------ARSPFVKKF---KTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLW 584
            E+ +++ Y  WK   P LYD + +  L WP+L+ +W P  ++   K  +  RL +   T     N L IA+ ++  P   +A +   ++EE            ++P   KF   + I H GEVN+ R  PQN  I+AT      V++WD     ++H  L     +P + L GH     F L+  P T   + +G +DK+V +W
Sbjct:   22 EKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLIGTHTSSDAQNYLQIAHVQLPNP---SAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNIIATMCTDGRVMVWD----RSKHPSLPTGQVNPQMELIGHTKEG-FGLSWSPHTAGQLATGSEDKTVRIW 217          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_BOVIN (Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.254e-16
Identity = 63/196 (32.14%), Postives = 92/196 (46.94%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +  P   A    S  + E        + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHI--PNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP--SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_SCHPO (Histone acetyltransferase type B subunit 2 OS=Schizosaccharomyces pombe GN=mis16 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.254e-16
Identity = 59/197 (29.95%), Postives = 93/197 (47.21%), Query Frame = 3
Query:   21 MERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE--QATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEAR---SPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEP-YVLSGGKDKSVVLWSXQ 593
            +++++ + Y  WK  VP LYD +  H L WPSL+ +W P  +    T  + QRL L   T G+  N L IA+ ++        E        A+   S  ++  + I H G+VNR R +PQ  +I+AT  +  +  I+D       H  L   ++ P  +L GH     F L   P  P  + +G +D+ + LW  Q
Sbjct:   22 LQKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSYTIEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTC----HDALTTGEALPQAVLKGHTAEG-FGLCWNPNLPGNLATGAEDQVICLWDVQ 213          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBP4A_XENLA (Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-A PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16
Identity = 64/198 (32.32%), Postives = 97/198 (48.99%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W   + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T + DVL++D    P++     + + +P+L L GHQ    + L+  P     +LS   D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDP--SGECNPNLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLW 205          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_RAT (Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16
Identity = 62/194 (31.96%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP--SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_MOUSE (Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16
Identity = 62/194 (31.96%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP--SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_MACFA (Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16
Identity = 62/194 (31.96%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP--SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_HUMAN (Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16
Identity = 62/194 (31.96%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDP--SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
The following BLAST results are available for this feature:
BLAST of EY649559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
RBBP4_DANRE7.388e-1733.33Histone-binding protein RBBP4 OS=Danio rerio GN=rb... [more]
HAT2_CANGA7.388e-1731.75Histone acetyltransferase type B subunit 2 OS=Cand... [more]
HAT2_ASPFU1.260e-1629.41Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
RBBP7_BOVIN6.254e-1632.14Histone-binding protein RBBP7 OS=Bos taurus GN=RBB... [more]
HAT2_SCHPO6.254e-1629.95Histone acetyltransferase type B subunit 2 OS=Schi... [more]
RBP4A_XENLA8.169e-1632.32Histone-binding protein RBBP4-A OS=Xenopus laevis ... [more]
RBBP7_RAT8.169e-1631.96Histone-binding protein RBBP7 OS=Rattus norvegicus... [more]
RBBP7_MOUSE8.169e-1631.96Histone-binding protein RBBP7 OS=Mus musculus GN=R... [more]
RBBP7_MACFA8.169e-1631.96Histone-binding protein RBBP7 OS=Macaca fascicular... [more]
RBBP7_HUMAN8.169e-1631.96Histone-binding protein RBBP7 OS=Homo sapiens GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649559 ID=EY649559; Name=EY649559; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACA
CAATGGAAGTCCTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAA
CCTCGTTTGGCCCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAG
CTACATACAAGAATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGC
AGTGTTCCAAATACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCG
AGTTGCAGCTGCAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCAC
CCTTTGTAAAGAAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGA
ATAAGAGAACTCCCACAGAACAGTAAAATAGTAGCCACACACACTGATAG
TCCTGATGTCCTCATTTGGGATGTTGAGGCACAACCTAATCGCCATGCTG
TCTTATGAGCTGCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAA
GATAATGCTGAATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCT
CTCTGGAGGCAAGGATAAGTCAGTGGTTTTATGGAGCATNCAAGACCATG
TCTCGGCTTTGGCAGCAGAACCAGGTTCTGCAAAATCTACAGCTTCTGGC
GGTGCCAACTCTAAAAAATGCTNCAGAGTGGTGGGAATGGGTGATAACCT
CTANAGAGCCCTTCTTTGGGGCACGATGTAAATACCTAGGNCATGAAGAC
ACTNGTGAAGACGTTCAGTNCTGTCCCATCAAGTGCACAGAGTNCTGCAN
TGTAGGTGATGATTCNTGCCTATACTATGGGATGGCAGATCTGGCTCTAC
TTCAGCTGTCAAGTTTGAAAAANCCATAATGCTGATATTCATGGGGTGAT
GGAATCCCCATGATGTGATCTAATAGGACGGGGGATTAT
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