EY649559

Overview
NameEY649559
Unique NameEY649559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649559_ssr113 microsatellite EY649559_ssr113:113..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: MSI3_ARATH (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.067e-15
Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 3
Query:   33 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQ----LEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSXQDHVSALAAE 620
            V++ ++ WK   P LYD + +H L WPSL+  W P       +  Y    +L L   T G   + L++A  +VV P   A   +   ++E   P V+  + I   GEVNR R +PQ   +V   T   +V ++D      +      ++  PDL L GH+            E Y+LSG +D+ + LW     VSA A +
Sbjct:   15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSGGAQDFLMVA--DVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQ---TSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWD----VSATATD 205          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 61/194 (31.44%), Postives = 89/194 (45.88%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S  VL++D    P +     + + +PDL L GHQ              ++LS   D +V LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDP--SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_ENCCU (Histone acetyltransferase type B subunit 2 OS=Encephalitozoon cuniculi GN=HAT2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15
Identity = 58/201 (28.86%), Postives = 92/201 (45.77%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQL--EQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF-VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSG-GKDKSVVLWSXQDHVSALA 614
            ++ V++ Y  WK  VP LYD + +H L WPSLS +W P +  ++   +  QRL LS  T GS    ++IA  E         E     NEE      +K  + I    E NR+R  P    ++A  +D PD+ ++D     +   +       PD++L GH     F L+     P  L+G G+   V ++      S+++
Sbjct:    8 QKIVNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTTQRLLLSTHTSGSEEEYILIAKVEF------PDEFDESLNEEVGGDMRLKIIQRISIMDEANRVRYNPSACNVLAVRSDLPDIHVYDYTKHLSHEKI-----PRPDMVLRGHSAGG-FGLSWNHLNPGELAGCGEGGEVCVFDVSQESSSIS 196          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: LIN53_CAEBR (Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae GN=lin-53 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.541e-14
Identity = 65/205 (31.71%), Postives = 93/205 (45.37%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLWSXQDHVSA 608
            +R  +D Y  WK   P LYD +  H L WPSLS +W P++E+ +  +   RL L   T     + L+   C    P   A    S+++ E        A +  V+    I H GEVNR R +PQ   I+AT + S DV I+D    P   +V      +P L L GH     + L+  P  E  +LS   D++V  W    +  A
Sbjct:   11 DRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKESSDHTVHRLILGTHTSDEQNHLLISKIC---MPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYP---SVPKDNTFNPLLKLKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHWDINGNAGA 208          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.012e-14
Identity = 58/197 (29.44%), Postives = 92/197 (46.70%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEAR-------SPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLW 584
            E+ +++ Y  WK   P LYD +  H L WPSL+  W P       K  + +++ L   T     N L++A   +     A+ E +   + +         S  ++  + I H GEVNR R +PQN  I+AT T S +V I+D    P            P+L LTGH+    + ++  P  E ++LS   D+S+ +W
Sbjct:   10 EKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSDEEQNYLMVAKVHLPVDE-ASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTP--DGKCSPNLKLTGHKKEG-YGISWNPRKEGHLLSCSDDQSICMW 202          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.628e-14
Identity = 61/211 (28.91%), Postives = 97/211 (45.97%), Query Frame = 3
Query:   36 DDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEH-------ISQFNEE-----------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADS--HPDLILTGHQDNAEFALAMCP-TEPYVLSGGKDKSVVLWSXQDH 599
            ++ Y  WK   P LYD +  H L WPSL+C+W P  E    ++  + RL L   T G   N L  A  ++       A +       + Q++E+           AR   V+K   I H GE+NR R  PQN  ++AT + +    I+D      +H+   +AD    PD+IL G Q    + L+  P  + ++L+  +D +V  W   ++
Sbjct:   72 NEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWLPDKESPAGQSYTQHRLLLGTHTSGQDQNYLQFAQVQLPTTGADGASNSAESRLDLKQYDEDKGEIGSYSATTARLSIVQK---INHDGEINRARYCPQNCDLIATRSVTGKTYIFD----RTKHSNTPSADGVCRPDIILEG-QHKEGYGLSWSPLKQGHILAASEDTTVCHWDINNY 274          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: HAT2_KLULA (Histone acetyltransferase type B subunit 2 OS=Kluyveromyces lactis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.453e-13
Identity = 61/198 (30.81%), Postives = 96/198 (48.48%), Query Frame = 3
Query:   30 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN-----RQRLYLSEQTDGSVPNTLVIA------NCEVVKPRVA-AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            ++++ Y  W S VP++YD+++   L WPSL+ +W P   Q    +     RQ L +   T  + PN L IA      N    KP V+  A+     + +++   V+KFK   H  EV R R +PQ+  I+AT   +  V I+D   +   H  + A+ S+       H++N  + LA  PT    +LS   D +V LW
Sbjct:   12 TINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFK---HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAI-ASFSY-------HKENG-YGLAFNPTVSGQLLSASDDGTVALW 197          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: LIN53_CAEEL (Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.883e-12
Identity = 63/199 (31.66%), Postives = 91/199 (45.73%), Query Frame = 3
Query:   24 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLI-LTGHQDNAEFALAMCPT-EPYVLSGGKDKSVVLW 584
            +R  +D Y  WK   P LYD +  H L WPSLS +W P + +    +   RL L   T     + L+   C    P   A    S+++ E RS +         V+    I H GEVNR R +PQ S I+AT +   DV I+D      +H+ +   ++   LI L GH     + L+  P  E  +LS   D++V  W
Sbjct:   11 DRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSDEQNHLLISKIC---MPTDDAQFDASRYDTE-RSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDY----LKHSAVPRDNTFNPLIRLKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHW 200          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: YEC6_SCHPO (Uncharacterized WD repeat-containing protein C25H1.06 OS=Schizosaccharomyces pombe GN=SPAC25H1.06 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.459e-12
Identity = 47/173 (27.17%), Postives = 82/173 (47.40%), Query Frame = 3
Query:   15 KGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEA---------RSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQ 500
            K +E  + + + +WK     LY+ L    L WPSLS +W   +E  T K   + RL L       +PN L +A+ ++        + +  +NE+           S   +  + I+H G+VNR+R +PQN  I+AT +   +  I+D      ++  + A +  P++ L GH+
Sbjct:   14 KFLENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFD----RTKYTSMPAEEFLPNISLIGHK 182          
BLAST of EY649559 vs. ExPASy Swiss-Prot
Match: RBA1_CAEEL (Probable histone-binding protein rba-1 OS=Caenorhabditis elegans GN=rba-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.346e-12
Identity = 52/187 (27.81%), Postives = 80/187 (42.78%), Query Frame = 3
Query:   54 WKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQA--TYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRV--------AAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVL*AADSHPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLW 584
            WK  VP LYD +    + WPSLS +W P + +   +  +  R+     T G V N L+I+   +             +  E    + E + + +  + K I HPGEV+R R +P N  I+A+   S DV I+D    P+           P L L GH+            E ++L+ G D  +  W
Sbjct:   17 WKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIK-INHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPK---DTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHW 199          
The following BLAST results are available for this feature:
BLAST of EY649559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
MSI3_ARATH1.067e-1530.00WD-40 repeat-containing protein MSI3 OS=Arabidopsi... [more]
RBBP7_PONAB5.295e-1531.44Histone-binding protein RBBP7 OS=Pongo abelii GN=R... [more]
HAT2_ENCCU6.915e-1528.86Histone acetyltransferase type B subunit 2 OS=Ence... [more]
LIN53_CAEBR1.541e-1431.71Probable histone-binding protein lin-53 OS=Caenorh... [more]
RBBD_DICDI2.012e-1429.44Probable histone-binding protein rbbD OS=Dictyoste... [more]
HAT2_USTMA2.628e-1428.91Histone acetyltransferase type B subunit 2 OS=Usti... [more]
HAT2_KLULA8.453e-1330.81Histone acetyltransferase type B subunit 2 OS=Kluy... [more]
LIN53_CAEEL1.883e-1231.66Probable histone-binding protein lin-53 OS=Caenorh... [more]
YEC6_SCHPO2.459e-1227.17Uncharacterized WD repeat-containing protein C25H1... [more]
RBA1_CAEEL9.346e-1227.81Probable histone-binding protein rba-1 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649559 ID=EY649559; Name=EY649559; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACA
CAATGGAAGTCCTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAA
CCTCGTTTGGCCCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAG
CTACATACAAGAATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGC
AGTGTTCCAAATACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCG
AGTTGCAGCTGCAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCAC
CCTTTGTAAAGAAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGA
ATAAGAGAACTCCCACAGAACAGTAAAATAGTAGCCACACACACTGATAG
TCCTGATGTCCTCATTTGGGATGTTGAGGCACAACCTAATCGCCATGCTG
TCTTATGAGCTGCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAA
GATAATGCTGAATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCT
CTCTGGAGGCAAGGATAAGTCAGTGGTTTTATGGAGCATNCAAGACCATG
TCTCGGCTTTGGCAGCAGAACCAGGTTCTGCAAAATCTACAGCTTCTGGC
GGTGCCAACTCTAAAAAATGCTNCAGAGTGGTGGGAATGGGTGATAACCT
CTANAGAGCCCTTCTTTGGGGCACGATGTAAATACCTAGGNCATGAAGAC
ACTNGTGAAGACGTTCAGTNCTGTCCCATCAAGTGCACAGAGTNCTGCAN
TGTAGGTGATGATTCNTGCCTATACTATGGGATGGCAGATCTGGCTCTAC
TTCAGCTGTCAAGTTTGAAAAANCCATAATGCTGATATTCATGGGGTGAT
GGAATCCCCATGATGTGATCTAATAGGACGGGGGATTAT
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