EG358334

Overview
NameEG358334
Unique NameEG358334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.690e-13
Identity = 42/147 (28.57%), Postives = 71/147 (48.30%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            L+WE  FF    P    ++S  P    +Y +   E+A +L  LA K+L +                          K++ YP CP+P+L  G+ AH+D   +  +  +  V GLQL    +WV    + +SI++++GD IE+++NG+
Sbjct:   84 LDWESTFFLRHLPSS--NISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13
Identity = 45/166 (27.11%), Postives = 80/166 (48.19%), Query Frame = 2
Query:   11 QASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGL-QLFYKD-KWVTAKCVPNSIILHIGDTIEILSN 502
            +   K+   G +L+N     L W+D   H  +P D+  ++ WP+ P+ Y E  ++Y+ ++R L  ++L                           M  NYYP CP P   LG   H D + +T +L   +PGL QL  KD  W+  + +P + ++++G T+++++N
Sbjct:  108 EQKAKLYVEGEQLSNEEF--LYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRML----DYICEGLGLKLGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLIT-LLQQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITN 266          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13
Identity = 42/158 (26.58%), Postives = 71/158 (44.94%), Query Frame = 2
Query:   38 GSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            G +        ++WE  F+    P  K ++S  P     Y     E+A +L  LA ++L +                          K++ YP CP PEL  G+ AHTD   L  +   + V GLQL    +W+    + +SI++++GD +E+++NG+
Sbjct:   73 GLEAVKTEVNDMDWESTFYLRHLP--KSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13
Identity = 40/147 (27.21%), Postives = 72/147 (48.98%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            L+WE  FF    P    ++S  P    +Y E   ++A++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL    +W+    + +SI++++GD +E+++NG+
Sbjct:   84 LDWESTFFLRHLPVS--NISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.022e-12
Identity = 39/147 (26.53%), Postives = 72/147 (48.98%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            ++WE  FF    P    ++S  P    +Y E   ++A++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL    +W+    + +SI++++GD +E+++NG+
Sbjct:   84 MDWESTFFLKHLPIS--NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.022e-12
Identity = 40/157 (25.48%), Postives = 74/157 (47.13%), Query Frame = 2
Query:   38 GSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 505
            G + A      ++WE  FF    PE   ++S       +Y +   E+A++L +LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL     W+    + ++I++++GD +E+++NG
Sbjct:   73 GLEAAQAEVNDMDWESTFFLRHLPES--NISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNG 227          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.022e-12
Identity = 29/66 (43.94%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  305 NYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSN 502
            NYYP CPQPEL +G   HTD+  +T +L + + GLQ+ +++ WV     P S++++IGD +++LSN
Sbjct:  219 NYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSN 284          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.743e-12
Identity = 42/170 (24.71%), Postives = 77/170 (45.29%), Query Frame = 2
Query:    2 RGEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            R ++    +Q  G   A +    ++WE  F+    P    ++S  P     Y +   E+A Q+  L+ ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL     WV    + +SI++++GD +E+++NG+
Sbjct:   67 REQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTS--NISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGK 234          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12
Identity = 49/183 (26.78%), Postives = 80/183 (43.72%), Query Frame = 2
Query:    2 RGEQASGKIQGYGSKLANNASGQLEWED---YFFHLIYPEDKRDMSIWPKTPSDYTEAT------------SEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 505
            R  +  G + GY S  A+  + +L W++   + FH        D +  P   +DY  +T             +Y  +++ L+  I+ +                         M+ NYYP CP+PE  LG   H D +ALT +L + V GL++    +W     VP +++++IGDT   LSNG
Sbjct:  128 RARRVPGTVSGYTSAHADRFASKLPWKETLSFGFH--------DRAAAPVV-ADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSI---MRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNG 298          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12
Identity = 49/183 (26.78%), Postives = 80/183 (43.72%), Query Frame = 2
Query:    2 RGEQASGKIQGYGSKLANNASGQLEWED---YFFHLIYPEDKRDMSIWPKTPSDYTEAT------------SEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 505
            R  +  G + GY S  A+  + +L W++   + FH        D +  P   +DY  +T             +Y  +++ L+  I+ +                         M+ NYYP CP+PE  LG   H D +ALT +L + V GL++    +W     VP +++++IGDT   LSNG
Sbjct:  128 RARRVPGTVSGYTSAHADRFASKLPWKETLSFGFH--------DRAAAPVV-ADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSI---MRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNG 298          
The following BLAST results are available for this feature:
BLAST of EG358334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
ACCO1_MALDO2.690e-1328.571-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
HY6H_HYONI4.588e-1327.11Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO_PRUMU4.588e-1326.581-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO3_PETHY4.588e-1327.211-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY1.022e-1226.531-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_CUCME1.022e-1225.481-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCH3_SOLLC1.022e-1243.941-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO_DIACA1.743e-1224.71Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
GAOX2_ORYSJ2.277e-1226.78Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI2.277e-1226.78Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]

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Properties
Property NameValue
Genbank description9h11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl009h11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358334 ID=EG358334; Name=EG358334; organism=Citrus sinensis; type=EST; length=508bp
ACGCGGGGAGCAGGCTTCGGGAAAGATTCAGGGTTACGGAAGCAAGCTAG
CTAATAATGCTAGTGGCCAGCTTGAGTGGGAGGACTATTTCTTCCACCTT
ATTTATCCTGAAGATAAAAGGGATATGTCCATTTGGCCTAAGACTCCAAG
CGACTATACAGAGGCTACCAGTGAATACGCAAGGCAACTGAGAAGCCTAG
CGACGAAAATTCTGGCAGTGTTGTCACTTGGCTTGGGACTGGAAGAGGGG
AGGCTGGAAAAGGAAGTTGGTGGCCTAGAAGAGCTCCTTCTTCAGATGAA
GATCAATTACTATCCCAAATGCCCTCAACCAGAACTGGCTCTTGGTGTTG
AAGCTCACACAGATGTGAGTGCACTCACTTTCATTCTTCACAACATGGTT
CCGGGCCTGCAGCTCTTCTACAAAGACAAATGGGTGACTGCTAAATGTGT
TCCAAATTCGATCATCTTGCACATTGGTGACACCATTGAAATTCTGAGCA
ATGGCGAG
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