EG358334

Overview
NameEG358334
Unique NameEG358334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 2.974e-12
Identity = 38/151 (25.17%), Postives = 67/151 (44.37%), Query Frame = 2
Query:   56 NASGQLEWEDYF-FHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 505
            +  G+  W D       +P D   ++ WP TP    +   ++  Q R +  ++L +                         + IN+YP CP P+ ALG   H D + +T +L   V GL++ YK  W+     PN+ +++ G  +E+++NG
Sbjct:  112 DTGGEKYWRDCLRLACPFPVDD-SINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVI---LNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNG 258          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.884e-12
Identity = 41/146 (28.08%), Postives = 68/146 (46.58%), Query Frame = 2
Query:   74 EWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            +WE  FF    P    +MS       +Y +   E+A +L  LA ++L +                          K++ YP CP+PEL  G+ AHTD   L  +   + V GL +    KWV    + +SI++++GD +E+++NG+
Sbjct:   86 DWESTFFLRHLPVS--NMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGK 229          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.884e-12
Identity = 38/147 (25.85%), Postives = 70/147 (47.62%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            ++WE  FF    P    ++S  P     Y E   ++ ++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL    +W+    + +SI++++GD +E+++NG+
Sbjct:   84 MDWESTFFLRHLPSS--NISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12
Identity = 43/149 (28.86%), Postives = 70/149 (46.98%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQM--KINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            L+WE  FF    P    ++S  P    D      E+A +L +LA ++L +                            K++ YP CP+PEL  G+ AHTD   +  +  +  V GLQL    +W+    V +SI+++IGD +E+++NG+
Sbjct:   86 LDWESTFFLRHLPTS--NISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGK 232          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12
Identity = 41/168 (24.40%), Postives = 75/168 (44.64%), Query Frame = 2
Query:    8 EQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            E+    I+  G     +    ++WE  F+    P    ++S  P    DY     ++A ++  L+ ++L +                          K++ YP CP P+L  G+ AHTD   +  +  +  V GLQL    +WV    V +SI++++GD +E+++NG+
Sbjct:   63 ERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVS--NISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12
Identity = 41/152 (26.97%), Postives = 72/152 (47.37%), Query Frame = 2
Query:   62 SGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQM--KINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            +  ++WE  FF    P    ++S  P    ++ +   E+A +L  LA ++L +                            K++ YP CP+PEL  G+ AHTD   L  +   + V GLQL    +WV    + +SI++++GD +E+++NG+
Sbjct:   80 ANDMDWESTFFIRHLPVS--NLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGK 229          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12
Identity = 45/154 (29.22%), Postives = 72/154 (46.75%), Query Frame = 2
Query:   44 KLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 505
            + +N+ SG    +DYF   +  E ++    + K   DY EA S  + ++  L    L V                         M++N+YP C  P+L LG   H D S+LT +  + V GLQ+F  ++W + +  P + +++IGDT   LSNG
Sbjct:  155 QFSNDNSGSRTVQDYFSDTLGQEFEQ----FGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSI----------MRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNG 294          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12
Identity = 39/147 (26.53%), Postives = 69/147 (46.94%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            L+WE  FF    P    ++   P     Y E   ++A++L  LA ++L +                          K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL    +W+    +  SI++++GD +E+++NG+
Sbjct:   84 LDWESTFFLRHLPVS--NICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.130e-11
Identity = 37/147 (25.17%), Postives = 69/147 (46.94%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            ++WE  +F    P+   ++S  P    +Y     ++A +L  LA  +L +                          K+  YP CP+ +L  G+ AHTD   +  +  +  V GLQL   D+W+    + +SI++++GD +E+++NG+
Sbjct:   84 MDWESTYFLRHLPQS--NISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGK 228          
BLAST of EG358334 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.927e-11
Identity = 42/149 (28.19%), Postives = 69/149 (46.31%), Query Frame = 2
Query:   71 LEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQM--KINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 508
            L+WE  FF    P    ++S  P    D      E+AR+L  LA ++L +                            K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL    +W+    +  SI+++IGD +E+++NG+
Sbjct:   86 LDWESTFFLRHLPTS--NISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGK 232          
The following BLAST results are available for this feature:
BLAST of EG358334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
IDS3_HORVU2.974e-1225.172'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCO3_CUCME3.884e-1228.081-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO2_SOLLC3.884e-1225.851-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_DORSP5.072e-1228.861-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_ARATH5.072e-1224.401-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_PERAE6.625e-1226.971-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
GAOX2_ARATH8.652e-1229.22Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCO_TOBAC8.652e-1226.531-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_DIOKA1.130e-1125.171-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO2_DORSP1.927e-1128.191-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

Pages

back to top
Properties
Property NameValue
Genbank description9h11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl009h11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358334 ID=EG358334; Name=EG358334; organism=Citrus sinensis; type=EST; length=508bp
ACGCGGGGAGCAGGCTTCGGGAAAGATTCAGGGTTACGGAAGCAAGCTAG
CTAATAATGCTAGTGGCCAGCTTGAGTGGGAGGACTATTTCTTCCACCTT
ATTTATCCTGAAGATAAAAGGGATATGTCCATTTGGCCTAAGACTCCAAG
CGACTATACAGAGGCTACCAGTGAATACGCAAGGCAACTGAGAAGCCTAG
CGACGAAAATTCTGGCAGTGTTGTCACTTGGCTTGGGACTGGAAGAGGGG
AGGCTGGAAAAGGAAGTTGGTGGCCTAGAAGAGCTCCTTCTTCAGATGAA
GATCAATTACTATCCCAAATGCCCTCAACCAGAACTGGCTCTTGGTGTTG
AAGCTCACACAGATGTGAGTGCACTCACTTTCATTCTTCACAACATGGTT
CCGGGCCTGCAGCTCTTCTACAAAGACAAATGGGTGACTGCTAAATGTGT
TCCAAATTCGATCATCTTGCACATTGGTGACACCATTGAAATTCTGAGCA
ATGGCGAG
back to top