EG358333

Overview
NameEG358333
Unique NameEG358333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1029
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EG358333 vs. ExPASy Swiss-Prot
Match: HUTH_HALSA (Probable histidine ammonia-lyase OS=Halobacterium salinarium GN=hutH PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.926e-14
Identity = 55/215 (25.58%), Postives = 98/215 (45.58%), Query Frame = 3 
Query:   54 GESLNAAEAFSQAGIDGGFFELQPKEGLALVNGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLI-----------DVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVN 665
            GE + AAEA + A ++     LQ KEGLAL+NGT +  G+A++ L +A  +   ++   A+  E             H+++ H GQ  +A  + ++  GS  ++  +    +       QD Y++R  PQ  G   + +     ++  E+NS  DNPL+              R   + GGNF G  + + +  +  A+A +  +   +   L+N
Sbjct:  169 GERMPAAEALAAADLEP--VTLQAKEGLALINGTQLTTGVAALALVDAERVLRSADTAGALTTEVTMSTTASCAPAIHEVRPHDGQAVSARHIRNLTAGSEVLDHHRDCDRV-------QDAYSIRCLPQVHGAVRDALDHLRAAVATELNSATDNPLVFAGDRVGPRASGTDRAAVVSGGNFHGEVLALRLGYAASALAELAAISERRTDRLLN 374
[Close]
BLAST of EG358333 vs. ExPASy Swiss-Prot
Match: HUTH_HALS3 (Probable histidine ammonia-lyase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=hutH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.926e-14
Identity = 55/215 (25.58%), Postives = 98/215 (45.58%), Query Frame = 3 
Query:   54 GESLNAAEAFSQAGIDGGFFELQPKEGLALVNGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLI-----------DVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVN 665
            GE + AAEA + A ++     LQ KEGLAL+NGT +  G+A++ L +A  +   ++   A+  E             H+++ H GQ  +A  + ++  GS  ++  +    +       QD Y++R  PQ  G   + +     ++  E+NS  DNPL+              R   + GGNF G  + + +  +  A+A +  +   +   L+N
Sbjct:  169 GERMPAAEALAAADLEP--VTLQAKEGLALINGTQLTTGVAALALVDAERVLRSADTAGALTTEVTMSTTASCAPAIHEVRPHDGQAVSARHIRNLTAGSEVLDHHRDCDRV-------QDAYSIRCLPQVHGAVRDALDHLRAAVATELNSATDNPLVFAGDRVGPRASGTDRAAVVSGGNFHGEVLALRLGYAASALAELAAISERRTDRLLN 374
The following BLAST results are available for this feature:
BLAST of EG358333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
HUTH_HALSA3.926e-1425.58Probable histidine ammonia-lyase OS=Halobacterium ... [more]
HUTH_HALS33.926e-1425.58Probable histidine ammonia-lyase OS=Halobacterium ... [more]

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Properties
Property NameValue
Genbank description1h1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001h1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358333 ID=EG358333; Name=EG358333; organism=Citrus sinensis; type=EST; length=1029bp
ACATTGCCGGGCTGCTAACCGGCCGTCCGAATTCTGTAGCTGTTGGGCCA
AATGGGGAGTCGTTGAATGCTGCTGAGGCTTTTAGCCAGGCTGGAATTGA
TGGAGGTTTCTTCGAGTTGCAGCCTAAAGAGGGACTTGCGTTAGTTAACG
GAACAGGAGTGGGTGCTGGCTTGGCTTCTATTGTTCTTTTTGAGGCTAAT
ATTTTAACTGTTTTGTCCGAAGTTTTGTCAGCAATTTTTGCGGAAGCTAT
GCAAGGAAAGCCTGAGTTTACGGATCATTTGACTCACAAGCTGAAGCATC
ACCCTGGACAAATTGAAGCTGCAGCTATAATGGAACATATCTTGGATGGT
AGCTCTTATGTTGAGGCAGCACAAAAATTCCATGAAATTGACCCTTTACA
GAAGCCTAAGCAAGATCGGTATGCTCTTCGAACTTCACCACAATGGTTAG
GCCCTCAAGCTGAAGTGATTCGAGCATCGACAAAGTCTATTGAGAGGGAG
ATTAACTCTGTGAATGATAATCCGTTGATTGATGTTTCAAGGAACAAGGC
ATTACACGGTGGCAATTTCCAGGGCACTCCAATTGGTGTCTCTATGGATA
ATTCAAGATTGGCAATTGCTTCGATTGGGAAACTCATGTTTGCTCAATTT
TCTGAGCTGGTTAATGATTTTTACAGTAATGGGTTGCCTTCAAATCTGTC
TGGTGGTAGGAATCCATGCTTGGATTATGGGTTCAAAGGTGCCGAAATAG
CAATGGCTGCGTATTGTTCCGAGCTCCAGTTTCTAGCCAATCCTGTGACT
AATCACGTCCAAAGTGCTGAGCAACACAACCCAAGATGTGAACTCTTTAG
GGCTGATCTCTGCCAGAAAAACAGCTGAGCTGTGATATCTTGAAGCTCAT
GTCCTCGACTTACTGATGCACTCTGCCAGCTATAGACTGAGCACTTGGAG
GAGATTCTGACGAGCACAGCTAGAACACATCAGCTAGCAGCTAGGAAGTC
TGACGATGGGGTCCAATTGGGGGAGCTTC
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