EG358322

Overview
NameEG358322
Unique NameEG358322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1104
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 3.098e-44
Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF+VT SDG TV SNNVA  GW FGQ+
Sbjct:  141 PVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQT 240          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 3.098e-44
Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF+VT SDG TV SNNVA  GW FGQ+
Sbjct:  141 PVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQT 240          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.426e-43
Identity = 82/101 (81.19%), Postives = 92/101 (91.09%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVS+RRVPC +KGGIRFTINGHSYFNLVLI+NVGGAGDV AVSIKGS+T  WQ MSRNWGQNWQSNSY+N QSLSF+VTTSDG T+VSN+VAP+ W FGQ+
Sbjct:  147 PVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQT 247          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.900e-42
Identity = 85/108 (78.70%), Postives = 91/108 (84.26%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS-SGRPGRY 322
            PV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDV +VS+KGSRT WQ MSRNWGQNWQSNSYLNGQSLSF VTTSD  +VVS NVAP  WSFGQ+ +G   RY
Sbjct:  148 PVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTGGQFRY 255          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.439e-41
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV YRRV C RKGGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNWQSN+ L+GQ+LSFKVTTSDG TV+SNN  P  WSFGQ+
Sbjct:  146 PVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQT 245          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 2.298e-39
Identity = 76/101 (75.25%), Postives = 88/101 (87.13%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV++RRVPC + GGIRFTING+ YF+LVLITNVGGAGD+RAVS+KGS+TD WQ MSRNWGQNWQSN+YL GQSLSF+VT SDG TVVS +V P  W FGQ+
Sbjct:  149 PVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQT 249          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 2.298e-39
Identity = 73/100 (73.00%), Postives = 86/100 (86.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV YRRV C+++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+ WQ MS NWG NWQ+ + L+GQ LSF+VT SDG TV S+NVAP+GWSFGQ+
Sbjct:  143 PVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQT 242          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.685e-39
Identity = 74/101 (73.27%), Postives = 86/101 (85.15%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVSYRRV C +KGGIRFTINGHSYFNLVL+TNVGGAGDV AV++K  R+  WQ +SRNWGQNWQS + L+GQ+LSF+VTT DG +VVSNN  P GWSFGQ+
Sbjct:  184 PVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQT 284          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.540e-38
Identity = 70/106 (66.04%), Postives = 90/106 (84.91%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD------WQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVS+RRV C+RKGG+RFT+NGH+YFNLVL+TNVGGAGDVR++++KGS +       WQPMSRNWGQNWQSN+YL+G++LSF+VT  DG ++   +VAPAGW FGQ+
Sbjct:  148 PVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQT 253          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.660e-38
Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVSYRR+PC +KGGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T W  +SRNWGQNWQSN+ L GQSLSF+V TSDG +  SNN+AP+ W FGQ+
Sbjct:  151 PVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQT 250          
The following BLAST results are available for this feature:
BLAST of EG358322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
EXPA4_ORYSJ3.098e-4480.00Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI3.098e-4480.00Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH3.426e-4381.19Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA5_ARATH2.900e-4278.70Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP14_ARATH1.439e-4179.00Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA2_ARATH2.298e-3975.25Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXP11_ORYSJ2.298e-3973.00Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA5_ORYSJ6.685e-3973.27Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA6_ORYSJ2.540e-3866.04Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA9_ARATH5.660e-3871.00Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]

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Properties
Property NameValue
Genbank description5b3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0005b3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358322 ID=EG358322; Name=EG358322; organism=Citrus sinensis; type=EST; length=1104bp
ACCTGTGTCTTACAGAAGGGTTCCATGCAGTAGGAAGGGAGGCATCAGAT
TCACGATCAACGGCCATTCTTACTTCAACTTAGTCCTAATCACAAACGTC
GGAGGCGCTGGTGATGTGCGTGCTGTTTCAATCAAAGGGTCAAGAACTGA
TTGGCAACCCATGTCAAGGAACTGGGGTCAAAACTGGCAAAGTAACAGTT
ACCTCAATGGCCAAAGCCTCTCATTTAAGGTCACCACAAGTGATGGCCAC
ACTGTTGTCTCTAACAATGTTGCCCCAGCTGGCTGGTCCTTTGGCCAATC
GAGCGGCCGCCCGGGCAGGTACGACCAAAGGAAGAGCTAATGAGCATTGG
CAATATTTTTGAAGAAGAGGAAAAAGATGAAGGGCCTCAAGTTCCCACAA
TTGATCTCAAGGAAATTGACTCTGAGGACAGAGTTGAACGCGAGAAATGT
CGCGAGGAGCTCAAGAAAGCTGCCATGGATTGGGGTGTTATGCACCTTGT
TAACCATGGGATTTCGGATGATCTCACTGAACGCGTCAAGAGAGCCGGTC
AGGCCTTTTTCGATCAGCCGGTTGAGGAGAAAGAGAAGTATGCCAATGAG
CAGGCTTCGGGAAAGATTCAGGGTTACGGAAGCAAGCTAGCTAATAATGC
TAGTGGCCAGCTTGAGTGGGAGGACTATTTCTTCCACCTTATTTATCCTG
AAGATAAAAGGGATATGTCCATTTGGCCTAAGACTCCAAGCGACTCTACA
GAGGCTACCAGTGAATACGCAAGGCAACTGAGAAGCCTAGCGACGAAAAT
TCTGGCAGTGTTGTCACTTGGCTTGGGACTGGAAGAGGGGAGGCTGGAAA
AGGAAGTTGGTGGCCTAGAAGAGCTCCTTCTTCAGATGAAGATCAATTAC
TATCCCAAATGCCCTCAACCAGAACTGGCTCTTGGTGTTGAAGCTCACAC
AGATGTGAGTGCACTCACTTTCATTCTTCACACATGGTTCGGGCTTGCAG
CTCTTCTACAAGACAATGGGTGACTGCTAATGGGTTCCAAATTCGATCAT
CTTGCAATGTGACCATGATTCTGAGCATGGGAGATACCTCGCCGCGAACA
CGCT
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