EG358322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 7.392e-38 Identity = 69/100 (69.00%), Postives = 86/100 (86.00%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PV Y+RVPC+++GG+RFTING YF LVL++NVGG G +++VSIKGSRT W MSRNWG NWQSN+YL+GQSLSFKVT+SDG T+ +VAPAGW+FGQ+ Sbjct: 154 PVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQT 253
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.151e-37 Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIK---GSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PVSYRRV C RKGG+RFTINGHSYFNLVL++NVGGAGDV AV++K G + WQ M+RNWGQNWQS + L+GQ+LSF VTT D +VVS NVAPAGW+FGQ+ Sbjct: 155 PVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQT 257
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 3.668e-37 Identity = 72/100 (72.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PVSYRRVPC +KGG+RFTING YFNLVLITNV GAGD+ S+KG+ T W PMSRNWGQNWQSNS L GQ+LSF+VT SD T S N APAGW FGQ+ Sbjct: 157 PVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQT 256
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.067e-36 Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PVSYRRVPC + GGIRFT+NG YFNLVL+TNV GAGD+ VS+KGS+TDW MSRNWGQNWQSN+ L GQSLSF+VT SD + S NVAPA W FGQ+ Sbjct: 155 PVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQT 254
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 4.056e-36 Identity = 69/100 (69.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PVSYRRVPC ++GGIRFTINGH YFNLVLITNV GAGD+ S+KGSRT W +SRNWGQNWQSN+ L GQ+LSF+VT SD T S N+ P+ W FGQ+ Sbjct: 150 PVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQT 249
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 9.036e-36 Identity = 67/100 (67.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 P+SYRRV C + GGIRFTINGH YFNLVLITNV GAGD+ S+KGS+T W ++RNWGQNWQSN+ L GQSLSF+VT+SD T S N+AP+ W FGQ+ Sbjct: 153 PISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQT 252
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 9.990e-35 Identity = 66/100 (66.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PVS+RRVPC ++GGIRFTING YFNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF+VT+SD + S N+APA W FGQ+ Sbjct: 150 PVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQT 249
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.704e-34 Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFG 295 PV+YRRVPC R GGIRF +NGHSYF LVL+TNVGG+G V + IKGS T W MSRNWG NWQSN+ L+GQ+LSF+V DG V + +VAPAGWSFG Sbjct: 144 PVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFG 241
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.958e-34 Identity = 62/100 (62.00%), Postives = 83/100 (83.00%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PV+++RV C+RKGG+RFTING+SYF LVLITNVGG G +++V IKG++T W MSRNWG NWQ+N+YLN Q++SF VT++ G T+V +VAP+ W FGQ+ Sbjct: 143 PVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQT 242
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.105e-33 Identity = 63/101 (62.38%), Postives = 77/101 (76.24%), Query Frame = 2 Query: 2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301 PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV G ++++ I GS TDW PM RNWG NW S SYL GQ+LSF+VT DG T+V N+ P+GW FGQ+ Sbjct: 154 PVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQT 254 The following BLAST results are available for this feature:
BLAST of EG358322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358322 ID=EG358322; Name=EG358322; organism=Citrus sinensis; type=EST; length=1104bpback to top |