EG358322

Overview
NameEG358322
Unique NameEG358322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1104
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 7.392e-38
Identity = 69/100 (69.00%), Postives = 86/100 (86.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV Y+RVPC+++GG+RFTING  YF LVL++NVGG G +++VSIKGSRT W  MSRNWG NWQSN+YL+GQSLSFKVT+SDG T+   +VAPAGW+FGQ+
Sbjct:  154 PVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQT 253          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.151e-37
Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIK---GSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVSYRRV C RKGG+RFTINGHSYFNLVL++NVGGAGDV AV++K   G +  WQ M+RNWGQNWQS + L+GQ+LSF VTT D  +VVS NVAPAGW+FGQ+
Sbjct:  155 PVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQT 257          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.668e-37
Identity = 72/100 (72.00%), Postives = 80/100 (80.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVSYRRVPC +KGG+RFTING  YFNLVLITNV GAGD+   S+KG+ T W PMSRNWGQNWQSNS L GQ+LSF+VT SD  T  S N APAGW FGQ+
Sbjct:  157 PVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQT 256          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.067e-36
Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVSYRRVPC + GGIRFT+NG  YFNLVL+TNV GAGD+  VS+KGS+TDW  MSRNWGQNWQSN+ L GQSLSF+VT SD  +  S NVAPA W FGQ+
Sbjct:  155 PVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQT 254          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.056e-36
Identity = 69/100 (69.00%), Postives = 80/100 (80.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVSYRRVPC ++GGIRFTINGH YFNLVLITNV GAGD+   S+KGSRT W  +SRNWGQNWQSN+ L GQ+LSF+VT SD  T  S N+ P+ W FGQ+
Sbjct:  150 PVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQT 249          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 9.036e-36
Identity = 67/100 (67.00%), Postives = 80/100 (80.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            P+SYRRV C + GGIRFTINGH YFNLVLITNV GAGD+   S+KGS+T W  ++RNWGQNWQSN+ L GQSLSF+VT+SD  T  S N+AP+ W FGQ+
Sbjct:  153 PISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQT 252          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 9.990e-35
Identity = 66/100 (66.00%), Postives = 80/100 (80.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PVS+RRVPC ++GGIRFTING  YFNLVL+TNV GAG++  + +KG+ T W  MSRNWGQNWQSNS L GQSLSF+VT+SD  +  S N+APA W FGQ+
Sbjct:  150 PVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQT 249          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.704e-34
Identity = 66/98 (67.35%), Postives = 77/98 (78.57%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFG 295
            PV+YRRVPC R GGIRF +NGHSYF LVL+TNVGG+G V  + IKGS T W  MSRNWG NWQSN+ L+GQ+LSF+V   DG  V + +VAPAGWSFG
Sbjct:  144 PVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFG 241          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 4.958e-34
Identity = 62/100 (62.00%), Postives = 83/100 (83.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV+++RV C+RKGG+RFTING+SYF LVLITNVGG G +++V IKG++T W  MSRNWG NWQ+N+YLN Q++SF VT++ G T+V  +VAP+ W FGQ+
Sbjct:  143 PVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQT 242          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.105e-33
Identity = 63/101 (62.38%), Postives = 77/101 (76.24%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV   G ++++ I GS  TDW PM RNWG NW S SYL GQ+LSF+VT  DG T+V  N+ P+GW FGQ+
Sbjct:  154 PVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQT 254          
The following BLAST results are available for this feature:
BLAST of EG358322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
EXPA1_ORYSJ7.392e-3869.00Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP21_ORYSJ2.151e-3770.87Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ORYSJ3.668e-3772.00Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA3_ARATH1.067e-3671.00Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA4_ARATH4.056e-3669.00Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXP16_ARATH9.036e-3667.00Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA6_ARATH9.990e-3566.00Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA8_ORYSJ1.704e-3467.35Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP12_ORYSJ4.958e-3462.00Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP14_ORYSJ1.105e-3362.38Expansin-A14 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank description5b3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0005b3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358322 ID=EG358322; Name=EG358322; organism=Citrus sinensis; type=EST; length=1104bp
ACCTGTGTCTTACAGAAGGGTTCCATGCAGTAGGAAGGGAGGCATCAGAT
TCACGATCAACGGCCATTCTTACTTCAACTTAGTCCTAATCACAAACGTC
GGAGGCGCTGGTGATGTGCGTGCTGTTTCAATCAAAGGGTCAAGAACTGA
TTGGCAACCCATGTCAAGGAACTGGGGTCAAAACTGGCAAAGTAACAGTT
ACCTCAATGGCCAAAGCCTCTCATTTAAGGTCACCACAAGTGATGGCCAC
ACTGTTGTCTCTAACAATGTTGCCCCAGCTGGCTGGTCCTTTGGCCAATC
GAGCGGCCGCCCGGGCAGGTACGACCAAAGGAAGAGCTAATGAGCATTGG
CAATATTTTTGAAGAAGAGGAAAAAGATGAAGGGCCTCAAGTTCCCACAA
TTGATCTCAAGGAAATTGACTCTGAGGACAGAGTTGAACGCGAGAAATGT
CGCGAGGAGCTCAAGAAAGCTGCCATGGATTGGGGTGTTATGCACCTTGT
TAACCATGGGATTTCGGATGATCTCACTGAACGCGTCAAGAGAGCCGGTC
AGGCCTTTTTCGATCAGCCGGTTGAGGAGAAAGAGAAGTATGCCAATGAG
CAGGCTTCGGGAAAGATTCAGGGTTACGGAAGCAAGCTAGCTAATAATGC
TAGTGGCCAGCTTGAGTGGGAGGACTATTTCTTCCACCTTATTTATCCTG
AAGATAAAAGGGATATGTCCATTTGGCCTAAGACTCCAAGCGACTCTACA
GAGGCTACCAGTGAATACGCAAGGCAACTGAGAAGCCTAGCGACGAAAAT
TCTGGCAGTGTTGTCACTTGGCTTGGGACTGGAAGAGGGGAGGCTGGAAA
AGGAAGTTGGTGGCCTAGAAGAGCTCCTTCTTCAGATGAAGATCAATTAC
TATCCCAAATGCCCTCAACCAGAACTGGCTCTTGGTGTTGAAGCTCACAC
AGATGTGAGTGCACTCACTTTCATTCTTCACACATGGTTCGGGCTTGCAG
CTCTTCTACAAGACAATGGGTGACTGCTAATGGGTTCCAAATTCGATCAT
CTTGCAATGTGACCATGATTCTGAGCATGGGAGATACCTCGCCGCGAACA
CGCT
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