EG358322

Overview
NameEG358322
Unique NameEG358322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1104
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.303e-31
Identity = 60/101 (59.41%), Postives = 76/101 (75.25%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV Y+RVPC +KGG+RFTINGH YF LVL+TNVG AG ++A+ +KGS++ DW  M+ NWG  W S +YL GQ LSF+VT +DG T+V  NV   GW FGQ+
Sbjct:  154 PVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQT 254          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.143e-30
Identity = 60/100 (60.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV Y R PC R GGIRF I GH Y+ LVL+TNV G+G V A  +KGS T+W  MSRNWG+NWQSN+YL GQ+LSF+V   DG  V + +VAPA W FG +
Sbjct:  146 PVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGST 245          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.493e-30
Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR--TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV++RRVPC R+GG+RFT+ G  YF LVL+TNV  AG VR++ ++GSR    W  MSRNWG NWQS +YL+GQ LSF+VT +DG T+V   V P  W FGQ+
Sbjct:  154 PVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQT 255          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 5.673e-30
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            P+ Y++V C R GG+RFTING +YF LVLI+NV G G++  V IKGS+++ W+ MSRNWG N+QSN+YLNGQSLSFKV  SDG    + NV P+ W FGQS
Sbjct:  148 PILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFGQS 248          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 9.676e-30
Identity = 58/108 (53.70%), Postives = 81/108 (75.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQSSGRPGRYD 325
            PV Y++V C R+GG+RFT++G +YF LVLITNV G+G V+A+S+KGS+T W P++RNWG NWQ NS L GQ+LSF+VT++ G T+  N+V P  W FG +     ++D
Sbjct:  147 PVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQQFD 254          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.715e-30
Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 1
Query:  388 QVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQ-PVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDSTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFIL 978
            QVP IDL++ D    V+       +  A+ +WG+  L+NHGI D+    +++ G+ FF+  P EEKE  A    S  I+GYG+ L     G+  W D+ FH I+P    +   WPK P    EA  EY +++R +  +I                            +KINYYP CP+P+LALGV AHTD+S +T ++
Sbjct:   54 QVPVIDLRDPDENKMVKL------IADASKEWGIFQLINHGIPDEAIADLQKVGKEFFEHVPQEEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYL-LKINYYPPCPRPDLALGVVAHTDMSYITILV 244          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.715e-30
Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 1
Query:  388 QVPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDSTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFIL 978
            +VP IDL + D +  V        + +A+ +WG+  +VNHGI +++  +++  G+ FF+ P EEKE  A  + S  I+GYG++L     G+  W D+ FH I+P    +   WPK P    EA  EYA++L+ L    L                           MKINYYP CP+P+LALGV AHTD+SA+T ++
Sbjct:   42 EVPVIDLSDSDEKKIVGL------VSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQ-LVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALGV-AHTDMSAITVLV 230          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.815e-29
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQS 301
            PV YRR+ C ++G +RFT++G   F  VLITNV G+GD+ AV IKGSRT W PM RNWGQNW  N+ L  Q+LSF+VT+SD  TV S NV+P  W++GQ+
Sbjct:  158 PVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQT 257          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 4.802e-29
Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQSSGRPGRYD 325
            PV YRRV C R+GG+RFT+ G  +F LVL+ NV G+G V AVS++G+ T W  MSRNWG NWQS + L GQ LSF VTT+ G  ++  +VAPAGW FGQ+     ++D
Sbjct:  147 PVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFSTSKQFD 254          
BLAST of EG358322 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 6.272e-29
Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 2
Query:    2 PVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQSSGRPGRYD 325
            P+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W  MSRNWG NWQ  + L GQ+LSF VT++ G T+V ++V PAGWSFGQ+     ++D
Sbjct:  141 PILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQQFD 248          
The following BLAST results are available for this feature:
BLAST of EG358322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
EXP13_ORYSJ2.303e-3159.41Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA9_ORYSJ1.143e-3060.00Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP29_ORYSJ1.493e-3057.84Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH5.673e-3060.40Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP28_ORYSJ9.676e-3053.70Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
FLS_PETHY9.715e-3034.85Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_EUSGR9.715e-3036.04Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
EXP13_ARATH2.815e-2958.00Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]
EXP27_ORYSJ4.802e-2954.63Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXP18_ORYSJ6.272e-2952.78Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank description5b3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0005b3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358322 ID=EG358322; Name=EG358322; organism=Citrus sinensis; type=EST; length=1104bp
ACCTGTGTCTTACAGAAGGGTTCCATGCAGTAGGAAGGGAGGCATCAGAT
TCACGATCAACGGCCATTCTTACTTCAACTTAGTCCTAATCACAAACGTC
GGAGGCGCTGGTGATGTGCGTGCTGTTTCAATCAAAGGGTCAAGAACTGA
TTGGCAACCCATGTCAAGGAACTGGGGTCAAAACTGGCAAAGTAACAGTT
ACCTCAATGGCCAAAGCCTCTCATTTAAGGTCACCACAAGTGATGGCCAC
ACTGTTGTCTCTAACAATGTTGCCCCAGCTGGCTGGTCCTTTGGCCAATC
GAGCGGCCGCCCGGGCAGGTACGACCAAAGGAAGAGCTAATGAGCATTGG
CAATATTTTTGAAGAAGAGGAAAAAGATGAAGGGCCTCAAGTTCCCACAA
TTGATCTCAAGGAAATTGACTCTGAGGACAGAGTTGAACGCGAGAAATGT
CGCGAGGAGCTCAAGAAAGCTGCCATGGATTGGGGTGTTATGCACCTTGT
TAACCATGGGATTTCGGATGATCTCACTGAACGCGTCAAGAGAGCCGGTC
AGGCCTTTTTCGATCAGCCGGTTGAGGAGAAAGAGAAGTATGCCAATGAG
CAGGCTTCGGGAAAGATTCAGGGTTACGGAAGCAAGCTAGCTAATAATGC
TAGTGGCCAGCTTGAGTGGGAGGACTATTTCTTCCACCTTATTTATCCTG
AAGATAAAAGGGATATGTCCATTTGGCCTAAGACTCCAAGCGACTCTACA
GAGGCTACCAGTGAATACGCAAGGCAACTGAGAAGCCTAGCGACGAAAAT
TCTGGCAGTGTTGTCACTTGGCTTGGGACTGGAAGAGGGGAGGCTGGAAA
AGGAAGTTGGTGGCCTAGAAGAGCTCCTTCTTCAGATGAAGATCAATTAC
TATCCCAAATGCCCTCAACCAGAACTGGCTCTTGGTGTTGAAGCTCACAC
AGATGTGAGTGCACTCACTTTCATTCTTCACACATGGTTCGGGCTTGCAG
CTCTTCTACAAGACAATGGGTGACTGCTAATGGGTTCCAAATTCGATCAT
CTTGCAATGTGACCATGATTCTGAGCATGGGAGATACCTCGCCGCGAACA
CGCT
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