DY306876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOBK (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Okra / Type B1) GN=atpA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.147e-16 Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+G + + FP + + YS + + + E D+ +RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ +A+ G Sbjct: 407 LRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 540 HSP 2 Score: 23.0978 bits (48), Expect = 2.147e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT A VFW Sbjct: 394 PGGDLSEPVTQATLRIVKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOBL (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=atpA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 2.148e-16 Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+G + + FP + + YS + + + E D+ +RT+A +LQ E +L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ +A+ G Sbjct: 405 LRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDENVASDWTALRTRAMSLLQEEANLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLEKQYKMLKLVLFFYDETQRALNAG 538 HSP 2 Score: 23.0978 bits (48), Expect = 2.148e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT A VFW Sbjct: 392 PGGDLSEPVTQATLRIVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOBH (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=atpA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 2.148e-16 Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+G + + FP + + YS + + + E D+ +R KA +LQ E L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ A +A+ G Sbjct: 405 LRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLKLVLFFYDEAQRALNAG 538 HSP 2 Score: 23.0978 bits (48), Expect = 2.148e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT A VFW Sbjct: 392 PGGDLSEPVTQATLRIVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOB1 (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=atpA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 2.148e-16 Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 463 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALE-FFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 858 L IV+ F+G + + FP + + YS + + + E D+ +R KA +LQ E L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ A +A+ G Sbjct: 405 LRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLKLVLFFYDEAQRALNAG 538 HSP 2 Score: 23.0978 bits (48), Expect = 2.148e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT A VFW Sbjct: 392 PGGDLSEPVTQATLRIVKVFW 412
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_SULTO (V-type ATP synthase alpha chain OS=Sulfolobus tokodaii GN=atpA PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 2.791e-16 Identity = 50/166 (30.12%), Postives = 90/166 (54.22%), Query Frame = -2 Query: 310 FPFVKLVYFYSSF-STALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLT 804 +P + + +S++ +++++ DP++ +R +VL RED+L +IV+LVG ++LAE DK+ LE AKL+++ +L QNA+ D F K V +MR I FYN + + KG + I+ + + Y + + + E E L A F L ++++ Sbjct: 427 YPAINWIQGFSAYVDLVAQWWHKNVDPNWKEMRDTMMKVLIREDELRQIVRLVGPESLAEKDKLVLEAAKLIKDAFLKQNAYDDIDAFSSPQKQVRIMRLIYIFYNQSQDLISKGVPLKKILDKVGPIEPEIIRIKYTIKNDELNKIDEIENKLKATFDSLLKEVS 592 HSP 2 Score: 24.2534 bits (51), Expect = 2.791e-16 Identity = 11/21 (52.38%), Postives = 12/21 (57.14%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG F+ PVTS VFW Sbjct: 395 PGGDFTEPVTSNTLRFVRVFW 415
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRZJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain JJA) GN=atpA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.628e-16 Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858 L IV+ F+G + FP + + YS + ++ + + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541 HSP 2 Score: 20.7866 bits (42), Expect = 3.628e-16 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT VFW Sbjct: 394 PGGDISEPVTQNTLRIVKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRPN (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae GN=atpA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.628e-16 Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858 L IV+ F+G + FP + + YS + ++ + + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541 HSP 2 Score: 20.7866 bits (42), Expect = 3.628e-16 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT VFW Sbjct: 394 PGGDISEPVTQNTLRIVKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRPJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.628e-16 Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858 L IV+ F+G + FP + + YS + ++ + + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541 HSP 2 Score: 20.7866 bits (42), Expect = 3.628e-16 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT VFW Sbjct: 394 PGGDISEPVTQNTLRIVKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_STRP4 (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.628e-16 Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 460 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 858 L IV+ F+G + FP + + YS + ++ + + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 407 LRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541 HSP 2 Score: 20.7866 bits (42), Expect = 3.628e-16 Identity = 10/21 (47.62%), Postives = 10/21 (47.62%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT VFW Sbjct: 394 PGGDISEPVTQNTLRIVKVFW 414
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CLOTH (V-type ATP synthase alpha chain OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.715e-16 Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = -2 Query: 454 FFGFGLETWAEKPFPFVKLVYFYSSFSTAL-EFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGM 843 F+G + FP + + YS + + ++ E D+ +R+ +LQ E +L EIV+LVG DAL+ D++TLE AK +REDYL QNAF D + K M++ I+ FY +A+E G + Sbjct: 412 FWGLDSSLAYRRHFPAINWLQSYSLYLDIIGKWISENISRDWETLRSDTMRILQEEAELEEIVRLVGVDALSPSDRLTLEAAKSIREDYLHQNAFHEVDTYTSLNKQYRMLKLILGFYYSGKKALEAGVSI 542 HSP 2 Score: 23.0978 bits (48), Expect = 4.715e-16 Identity = 11/21 (52.38%), Postives = 11/21 (52.38%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG S PVT A VFW Sbjct: 393 PGGDLSEPVTQATLRIIKVFW 413 The following BLAST results are available for this feature:
BLAST of DY306876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306876 ID=DY306876; Name=DY306876; organism=Citrus sinensis; type=EST; length=1216bpback to top |