DY306204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_PROMH (Glutaminyl-tRNA synthetase OS=Proteus mirabilis (strain HI4320) GN=glnS PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.305e-36 Identity = 90/251 (35.86%), Postives = 134/251 (53.39%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ S+EEN+ L+++M AG + CLR K+DM P +RDPV YR HH+ G+K+ +YP YDF DA E ITH+L + E+ D Y + +++ + Y+F LN+ YT++SKRKL V VDGWDDPR PT+ G+ RRG E++ +F G +K N +E L + ++ PR AVI+ V L + + P+ + P H G ++ I+ID AD Sbjct: 144 SPYRSRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALENITHSLCTLEFQDNRRLYDWVLDNITIPCHPRQYEFSRLNLEYTVMSKRKLNQLVTENIVDGWDDPRMPTISGLRRRGYTAESIREFCQRIGVTKQDNNVEMASLEACIRDDLNENAPRAMAVID--PVRLVIENMPEGEEILTAPNHPNKPEMGTREVPFSREIYIDRAD 392
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_POLNS (Glutaminyl-tRNA synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=glnS PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.305e-36 Identity = 96/259 (37.07%), Postives = 142/259 (54.83%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRI---QEDLGVRK---VHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPV---CPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ + EEN++L+++M G + E LR K+DM PN +RDPV YR HHR GSK+ +YP YDF DA E I+H++ + E+ + Y I ++LGV K H ++F LN+ YT+ SKRKLL V+ V+GWDDPR PT+ GI RRG E++ F G SK W + T+++ + D + PR TAV++ ++++ D P K PRH Y G+ +T +WI+ D Sbjct: 170 SPFRDRTPEENLQLFRDMRDGKFKDGEHVLRLKIDMAHPNIVMRDPVVYRIRHTDHHRTGSKWCIYPLYDFTHCISDALENISHSICTLEFENNRPLYDWIVNSLKELGVFKDPVPHQHEFARLNLTYTITSKRKLLQLVEEKHVEGWDDPRMPTIVGIRRRGYTPESIRLFCERIGVSK---ADSWIDMSTLDQALRDDLEVRAPRATAVLKPLKLVVENFDAPTKEACS-APRHPNYPEWGNREFNFTRELWIEADD 424
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_ECO5E (Glutaminyl-tRNA synthetase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glnS PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.305e-36 Identity = 88/252 (34.92%), Postives = 138/252 (54.76%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKVH--IYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ S+EEN+ L+++M G + CLR K+DM P +RDPV YR HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ + VH Y+F LN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F G +K N +E L + ++ ++ PR AVI+ ++++ G + +P H G ++ IWID +D Sbjct: 144 SPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT--MPNHPNKPEMGSRQVPFSGEIWIDRSD 392
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_ECO57 (Glutaminyl-tRNA synthetase OS=Escherichia coli O157:H7 GN=glnS PE=3 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 1.305e-36 Identity = 88/252 (34.92%), Postives = 138/252 (54.76%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKVH--IYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ S+EEN+ L+++M G + CLR K+DM P +RDPV YR HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ + VH Y+F LN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F G +K N +E L + ++ ++ PR AVI+ ++++ G + +P H G ++ IWID +D Sbjct: 144 SPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVT--MPNHPNKPEMGSRQVPFSGEIWIDRSD 392
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_PHOLL (Glutaminyl-tRNA synthetase OS=Photorhabdus luminescens subsp. laumondii GN=glnS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.796e-36 Identity = 89/251 (35.46%), Postives = 138/251 (54.98%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ +IEEN+ L+++M AG + CLR K+DM P +RDPV YR HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + E++ + + Y+F LN+ YT++SKRKL V + V+GWDDPR PT+ G+ RRG ++ +F G +K N +E L + + ++ PR AV++ V L + + P+ + +P H G ++ I+ID AD Sbjct: 144 SPYRDRTIEENLVLFEKMRAGEFDEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQCGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLENITIDCRPRQYEFSRLNLEYTVMSKRKLNLLVADKIVEGWDDPRMPTISGLRRRGYTAASIREFCRRIGVTKQDNNVEMAALESCIRDDLNENAPRAMAVLD--PVRLVIENMPEGEQILSMPNHPNKPEMGSREVPFSREIYIDRAD 392
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_CLOPE (Glutaminyl-tRNA synthetase OS=Clostridium perfringens GN=glnS PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.475e-36 Identity = 93/253 (36.76%), Postives = 136/253 (53.75%), Query Frame = 1 Query: 1 ESKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKV-HIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPD-KSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 ES +N SIEEN+ L++ M G LR K+DM PN + RDP+ YR HH G K+ +YP YDFA P DA EGITH++ + E+ D Y ++ + V +F LN+ T++SKRKL V G VDGWDDPR PTV G+ RRG +++ F G +K + ++ L ++ + PR AVI + L +T+ P+ +S + I + K E AG A T++ ++I+ D Sbjct: 141 ESPYRNRSIEENLDLFERMRKGEFEDGSKVLRAKIDMSSPNINFRDPIIYRIAHASHHNTGDKWCIYPMYDFAHPLEDAIEGITHSICTLEFADHRPLYDWFVKECEMESVPRQIEFARLNITNTVMSKRKLKQLVDEGIVDGWDDPRMPTVAGLRRRGYTPKSIRNFCKAIGVAKADSTVDSQMLEHFIREDLQETAPRAMAVINPLK--LVITNYPEGESEILEIENNPKDESAGKRAVTFSREVYIERED 391
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_VIBHB (Glutaminyl-tRNA synthetase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=glnS PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 8.457e-36 Identity = 85/252 (33.73%), Postives = 137/252 (54.37%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLL-TLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ IEEN+ L+++M AG + CLR K+DM +RDPV YR HH+ G K+ +YP YDF DA EGITH++ + E+ D Y + +++ + + H Y+F LN+ YT++SKRKL V VDGWDDPR PTV G+ RRG ++ +F G +K N++E+ L + + ++ PR AV++ ++++ +G ++ + H G+ +T +WI+ D Sbjct: 144 SPYRDRPIEENLALFEKMRAGEFEEGKACLRAKIDMGSSFMVMRDPVIYRVRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFMDNRRLYDWVLDNITIDCRPHQYEFSRLNLEYTVMSKRKLNQLVTEKLVDGWDDPRMPTVSGLRRRGFTSASIREFCKRIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLDPVKIVIENFEEGAVETLT--VANHPNKPEMGEREVPFTREVWIERED 393
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_CLOP1 (Glutaminyl-tRNA synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=glnS PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 8.457e-36 Identity = 92/253 (36.36%), Postives = 136/253 (53.75%), Query Frame = 1 Query: 1 ESKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKV-HIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPD-KSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 ES +N S+EEN+ L++ M G LR K+DM PN + RDP+ YR HH G K+ +YP YDFA P DA EGITH++ + E+ D Y ++ + V +F LN+ T++SKRKL V G VDGWDDPR PTV G+ RRG +++ F G +K + ++ L ++ + PR AVI + L +T+ P+ +S + I + K E AG A T++ ++I+ D Sbjct: 141 ESPYRNRSVEENLDLFERMRKGEFEDGSKVLRAKIDMSSPNINFRDPIIYRIAHASHHNTGDKWCIYPMYDFAHPLEDAIEGITHSICTLEFADHRPLYDWFVKECEMESVPRQIEFARLNITNTVMSKRKLKQLVDEGIVDGWDDPRMPTVAGLRRRGYTPKSIRNFCKAIGVAKADSTVDSQMLEHFIREDLQETAPRAMAVINPLK--LVITNYPEGESEILEIENNPKDESAGKRAVTFSREVYIERED 391
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_HAEI8 (Glutaminyl-tRNA synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=glnS PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.105e-35 Identity = 99/300 (33.00%), Postives = 154/300 (51.33%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRK--VHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHADAHLISANEEITSLDWGECHTKRN-----LEGTHKGNGTQLSWIFASLE 882 S ++ +IEEN+ L+++M G + LR K+DM P +RDPV YR HH+ G K+ +YP YDF DA E ITH++ + E+ D Y + E++ + + H Y+F LN+ TL SKRKLL V + VDGW+DPR PT+ G+ RRG +L +F G +K N++E+ L ++ ++ PR AVI+ RV++ + + V P H G+ +T ++ID AD AN++ L G+ RN E K +++ IF + + Sbjct: 152 SPYRDRTIEENLALFEKMKNGEFAEGKASLRAKIDMASPFMVMRDPVIYRIKFASHHQTGDKWCIYPMYDFTHCISDAIERITHSICTLEFQDNRRLYDWVLENISIERPLPHQYEFSRLNLEGTLTSKRKLLKLVNDEIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSALEACIREDLNENAPRAMAVIDPVRVVI---ENFESEAVLTAPNHPNRPELGERQLPFTKELYIDRADFR-EEANKQYKRLVLGKEVRLRNAYVIKAERVEKDANGEITTIFCTYD 447
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_ALTMD (Glutaminyl-tRNA synthetase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=glnS PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.105e-35 Identity = 89/264 (33.71%), Postives = 142/264 (53.79%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHADAHLISANEEITSL 792 S ++ +E N+K + +M AG + EC LR K+DM P +RDPV YR HH+ G K+ VYP YDF DA EGITH+L + E+ D Y + E++ + Y+F LN+ YT+LSKR+L+ V+ V GWDDPR PT+ G+ RRG ++++F G +K N++E L + ++ PR AV++ ++++ + K+ + P H E G ++ ++I+ A+ SAN++ L Sbjct: 144 SPYRDTDVETNLKEFAKMTAGDYKEGECSLRAKIDMTSPFMCMRDPVIYRVKHAHHHQTGDKWCVYPMYDFTHCISDAIEGITHSLCTLEFQDNRRLYDWVIENISIDCTPRQYEFSRLNLEYTVLSKRRLIQLVEENHVSGWDDPRMPTIAGLRRRGYTPGSIVEFCKRIGVTKMDNMVEMSMLEACIRDDLNANAPRAMAVLDPIKLVIENYE-EGKTETLVAPNHPNDESMGTRNIGFSREVYIE-AEDFRESANKKFKRL 405 The following BLAST results are available for this feature:
BLAST of DY306204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306204 ID=DY306204; Name=DY306204; organism=Citrus sinensis; type=EST; length=1283bpback to top |