DY306204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_BORPA (Glutaminyl-tRNA synthetase OS=Bordetella parapertussis GN=glnS PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.595e-34 Identity = 91/258 (35.27%), Postives = 138/258 (53.49%), Query Frame = 1 Query: 1 ESKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQY----YRIQE--DLGVRKVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPD-KSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 +S ++ +E++ +EM G LR ++DM PN +LRDPV YR HHR G+ + +YP Y +A P DA EGITH++ + E+ D+ Y R+ E L H Y+F LN+ Y + SKRKLL V+ G VDGWDDPR PT+ G+ RRG ++ F SK+ + +++ L + +DPV PR AV++ + L +T+ P+ +S PR+ +AG +T +WI+ D Sbjct: 171 DSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLK--LVITNHPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDD 426
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_YERPY (Glutaminyl-tRNA synthetase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glnS PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.083e-34 Identity = 86/251 (34.26%), Postives = 133/251 (52.99%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ S+EEN+ L+++M AG CLR K+DM P +RDPV YR HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ + Y+F LN+ YT++SKRKL V V+GWDDPR PT+ G+ RRG ++ +F G +K N +E L + + ++ PR AV++ +V++ ++ +P H G + I+ID AD Sbjct: 144 SPYRDRSVEENLVLFEKMRAGGFAEGTACLRAKIDMASPFIVMRDPVLYRIKFAEHHQSGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNISIDCHPRQYEFSRLNLEYTIMSKRKLNQLVTEKVVEGWDDPRMPTISGLRRRGYTAASIREFCRRIGVTKQDNNVEMMSLESCIRDDLNEHAPRAMAVLDPIKVVIENRAAGEEWLT--MPNHPNNPEMGSRQVPFDSEIYIDRAD 392
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_BORPE (Glutaminyl-tRNA synthetase OS=Bordetella pertussis GN=glnS PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.083e-34 Identity = 91/258 (35.27%), Postives = 138/258 (53.49%), Query Frame = 1 Query: 1 ESKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQY----YRIQE--DLGVRKVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPD-KSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 +S ++ +E++ +EM G LR ++DM PN +LRDPV YR HHR G+ + +YP Y +A P DA EGITH++ + E+ D+ Y R+ E L H Y+F LN+ Y + SKRKLL V+ G VDGWDDPR PT+ G+ RRG ++ F SK+ + +++ L + +DPV PR AV++ + L +T+ P+ +S PR+ +AG +T +WI+ D Sbjct: 171 DSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLK--LVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDD 426
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_BORBR (Glutaminyl-tRNA synthetase OS=Bordetella bronchiseptica GN=glnS PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.083e-34 Identity = 91/258 (35.27%), Postives = 138/258 (53.49%), Query Frame = 1 Query: 1 ESKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQY----YRIQE--DLGVRKVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPD-KSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 +S ++ +E++ +EM G LR ++DM PN +LRDPV YR HHR G+ + +YP Y +A P DA EGITH++ + E+ D+ Y R+ E L H Y+F LN+ Y + SKRKLL V+ G VDGWDDPR PT+ G+ RRG ++ F SK+ + +++ L + +DPV PR AV++ + L +T+ P+ +S PR+ +AG +T +WI+ D Sbjct: 171 DSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLK--LVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDD 426
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_VIBVY (Glutaminyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=glnS PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.720e-34 Identity = 83/251 (33.07%), Postives = 136/251 (54.18%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ S EEN+ L+++M G + CLR K+DM +RDPV YR HH+ G K+ +YP YDF DA EGITH++ + E+ D Y + +++ + + H Y+F LN+ YT++SKRKL V V+GWDDPR PT+ G+ RRG ++ +F G +K N++E+ L + + ++ PR AV++ ++++ + + + NK E G+ ++ IWI+ D Sbjct: 144 SPYRDRSAEENLALFEKMRDGGFEEGKACLRAKIDMASSFMVMRDPVLYRVRFASHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFMDNRRLYDWVLDNITIDCRPHQYEFSRLNLEYTVMSKRKLNQLVTEKLVNGWDDPRMPTISGLRRRGFTPASIREFCKRIGVTKQENMIEFSSLESCIRDDLNENAPRAMAVLDPVKLVIENFPAGEVENLTVANHPNKPE-MGEREVPFSREIWIERED 393
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_RHOBA (Glutaminyl-tRNA synthetase OS=Rhodopirellula baltica GN=glnS PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.553e-34 Identity = 86/248 (34.68%), Postives = 140/248 (56.45%), Query Frame = 1 Query: 13 KNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHN-KYERAGDVATTYTITIWIDHAD 753 ++ + E+N++L + M AG + E LR K+DM PN +LRDPV YR +PHHR G K+ +YP YD+A D+ E IT ++ + E+ Y E+LG+ +F LNM +T++SKRKLL V+ V GWDDPR PT+ G+ RRG E++ F + G +K + ++ +L ++ ++ V PR AV++ + LT+T+ P+ + +N + E AG ++ ++I+ D Sbjct: 188 RDRTPEKNLELLRAMKAGKFKDGEKTLRAKIDMASPNINLRDPVMYRIAHVPHHRTGDKWCIYPMYDWAHGQSDSLEKITFSICTLEFEHHRPLYNWYCENLGIHHPRQIEFARLNMTFTVMSKRKLLQLVKENHVTGWDDPRMPTLVGLRRRGYTPESIRSFCADIGVAKFNSTIDVIRLENSVREHLNSVAPRRMAVLD--PIKLTITNWPEGKVEMMNAINNPEDESAGSREIPFSGELYIETED 433
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_BUCAP (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=glnS PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 4.640e-34 Identity = 87/251 (34.66%), Postives = 135/251 (53.78%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKV-HIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S +N SI EN+KL+++M G + E CLR K++M +RDPV YR HH+ K+ +YPTYDFA D+ EGITH+ + E+ D Y I ++ ++ Y+F LN+ Y++LSKRK+ ++ V+GWDDPR T+ G+ ++G ++ F G +K NL+E+ L +K ++ R AV+E ++ L D D I+P H K+ G +T TI+I+ D Sbjct: 145 SPYRNRSITENLKLFEKMKKGEFKEGEACLRAKINMSSSFIVMRDPVLYRIIFSTHHQTKKKWCIYPTYDFAHCLSDSIEGITHSFCTLEFQDNKNLYNWILKNTSIKHYSKQYEFSRLNLEYSILSKRKISILIEKKIVNGWDDPRILTISGLRKKGYTASSIRDFCHRIGITKQNNLIEFSMLEYCIRKELNKKAIRTMAVLEPIKIFLYNIDN-DHEEKLIVPNHPKHLHLGTHEIIFTNTIYIERED 394
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_YERE8 (Glutaminyl-tRNA synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glnS PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 6.061e-34 Identity = 85/251 (33.86%), Postives = 133/251 (52.99%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S ++ S+EEN+ L+++M AG CLR K+DM P +RDPV YR HH+ G+K+ +YP YDF DA EGITH+L + E+ D Y + +++ + Y+F LN+ Y+++SKRKL V V+GWDDPR PT+ G+ RRG ++ +F G +K N +E L + + ++ PR AV++ +V++ ++ +P H G + I+ID AD Sbjct: 144 SPYRDRSVEENLALFEKMRAGGFAEGTACLRAKIDMASPFMVMRDPVLYRIKFAEHHQSGNKWCIYPMYDFTHCISDAIEGITHSLCTLEFQDNRRLYDWVLDNISIECHPRQYEFSRLNLEYSIMSKRKLNLLVTEKVVEGWDDPRMPTISGLRRRGYTAASIREFCRRIGVTKQDNNVEMMALESCIRDDLNENAPRAMAVLDPIKVVIENRAAGEEWLT--MPNHPNNPDMGTRQVPFDSEIYIDRAD 392
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_BUCBP (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=glnS PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 6.061e-34 Identity = 87/253 (34.39%), Postives = 136/253 (53.75%), Query Frame = 1 Query: 1 ESKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRV-LLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 +S + SIE+N+ L+K+M G CLR K+DM ++RDPV YR HH+ K+ +YPTYDF DA E ITH+L + E+ D Y I + + + H Y+F L + Y++LSKRKL V N V+GWDDPR PT+ G+ RG ++ F + G +K N ++ L + + ++P+ PR+ AVI ++ + L+D ++ + IP H G + ++ T++ID D Sbjct: 143 DSPYRTQSIEKNLNLFKKMKQGKMLEGTACLRAKIDMASNCITMRDPVLYRIIFSKHHQTNKKWCIYPTYDFTHCISDALEKITHSLCTLEFQDHRKLYEWILKKIDISCNTHQYEFSRLKLEYSVLSKRKLNLLVNNKVVNGWDDPRMPTLSGLRNRGYTPSSIKLFCKKIGITKQENTIQLSFLESCIRSDLNPIAPRYMAVIHPIKIQICNLSDNYEE--ILNIPNHPTKPNMGCHKSIFSNTLYIDQND 393
BLAST of DY306204 vs. ExPASy Swiss-Prot
Match: SYQ_BUCAT (Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=glnS PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 6.061e-34 Identity = 84/251 (33.47%), Postives = 137/251 (54.58%), Query Frame = 1 Query: 4 SKCKNNSIEENMKLWKEMIAGSERGLECCLRGKLDMQDPNKSLRDPVYYRCNPIPHHRIGSKYKVYPTYDFACPFVDAKEGITHALRSSEYHDRNAQYYRIQEDLGVRKV-HIYDFIILNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEHGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEHRRVLLTLTDGPDKSFVRIIPRHNKYERAGDVATTYTITIWIDHAD 753 S +N +I+EN++L+++M G E CLR K++M + +RDPV YR I HH+ +K+ +YP YDFA D+ EGITH+L + E+ D Y I ++ V+ Y+F LN+ +++LSKRK+ + ++GWDDPR PT+ + R+G ++ F + G +K NL+E+ L +K ++ R A+++ ++ L D K I+P H G +T TI+ID +D Sbjct: 145 SPYRNRTIQENIELFEKMKKGDFSEGEACLRAKINMSSSSIIMRDPVLYRIIFIKHHQTQNKWCIYPMYDFAHCLSDSIEGITHSLCTLEFQDNKFLYNWILKNTSVKHYPKQYEFSRLNLEFSILSKRKIKILIDKNIIEGWDDPRIPTLSALRRKGYTPSSIKNFCQKIGVTKQNNLIEFSMLEHCIRKELNQTAIRTMAILDPIKIFLYNLDSNYKEEF-IVPNHPNNPEMGTHKIIFTNTIYIDRSD 394 The following BLAST results are available for this feature:
BLAST of DY306204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306204 ID=DY306204; Name=DY306204; organism=Citrus sinensis; type=EST; length=1283bpback to top |