DY306156

Overview
NameDY306156
Unique NameDY306156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1162
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.553e-17
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            Y +TG+LT KSDVYSFGVV LEL++GR A+       EQ+LV WA+P  +D+RK  ++ D +L G++P +A + A  +A  C+  +   RP +++V+
Sbjct:  261 YAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVV 357          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.717e-16
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  496 LTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            ++G+ + KSDVYSFGVV+LELL+GR     T+   EQSLV WA P L D   L +++D  L G YP K+    A +   C+  EP+ RPPMSEV+
Sbjct:  593 MSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVV 687          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.717e-16
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  496 LTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            ++G+ + KSD+YSFGVV+LELL+GR     T+   EQSLV WA P L D   L +++D  L G YP K+    A +   C+  EP+ RPPMSEV+
Sbjct:  590 MSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVV 684          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.526e-16
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            Y +TG+L  KSDVYSFGVVLLELL+GR  V       +QSLV WA P LS+  K+ + +D +LGG YP KA    A +A  C+  E   RP MS V+
Sbjct:  251 YAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSED-KVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVV 346          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.239e-15
Identity = 47/96 (48.96%), Postives = 56/96 (58.33%), Query Frame = 1
Query:  511 TTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERL 798
            T KSDVYSFGVV+LELL+GR      K   E+SLV WA P L D   L  I D  L G YP K+    A +   C+  EP+ RPPMSEV+    R+
Sbjct:  580 TPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEALVRM 675          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.239e-15
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 1
Query:  499 TGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            +G  T +SDVYSFGVV+LELL+GR +  + +   EQ LV WA P L D   L +++D  L GQYP K+    A +  +C+ +EP+ RP MSEV+
Sbjct:  663 SGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVV 756          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 4.230e-15
Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            Y +TG+L++KSDVYSFGVVLLELL+GR  V  T    +QSLV WA P LS+  K+ + +D +L   YP KA    A +A  C+  E   RP MS V+
Sbjct:  246 YAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSED-KVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVV 341          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.524e-15
Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            Y +TG++T KSDVYSFGVVLLELL+GR  V  T    +QSLV WA P LS+  K+ + +D KL   +P KA    A +A  C+  E   RP M+ V+
Sbjct:  252 YAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED-KVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVV 347          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 9.423e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLE 801
            Y  TG L  KSDVYSFGVVL E+++GR  + + K   E+ L+DW K Y +D ++   I+D +L   YP   A + A LA  CL    K RP M  V+   ERL+
Sbjct:  266 YVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVV---ERLK 366          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 9.423e-15
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 1
Query:  511 TTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERL 798
            T KSDVYSFGVV+LELL+GR      +   EQSLV WAKP L D   L  ++D  L G Y  ++  + A +   C+  EP LRPP+S V+   +RL
Sbjct:  591 TQKSDVYSFGVVMLELLTGRKPYDSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICVMTEPGLRPPVSNVVEALKRL 686          
The following BLAST results are available for this feature:
BLAST of DY306156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PBS1_ARATH1.553e-1743.30Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
SRF7_ARATH1.717e-1648.42Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
SRF6_ARATH1.717e-1647.37Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
Y2706_ARATH6.526e-1650.52Probable receptor-like protein kinase At2g47060 OS... [more]
SRF5_ARATH3.239e-1548.96Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
SRF3_ARATH3.239e-1546.81Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
PTI1_SOLLC4.230e-1549.48Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2197_ARATH5.524e-1548.45Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
Y5707_ARATH9.423e-1543.27Probable receptor-like protein kinase At5g47070 OS... [more]
SRF4_ARATH9.423e-1546.88Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3DB07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306156 ID=DY306156; Name=DY306156; organism=Citrus sinensis; type=EST; length=1162bp
GGTTGCTACAGGTCCGTTAAATTCCCATGTCTTTTACCTTGCTAGTTAAT
ACTTCTGAATCAAGTTTGTGAATTCTCCGTTGATGTCAATCTGCTATCAT
TAGTTCTTTGATGTTCAATGTAAATCAATCATGTTCTAGCAATCAGAAAA
TGTTTAATCTATTCTGCGTTTTCATATATTGGATTAAAATTGAACTGAGG
TGGAATCTAATGATGATGAACATTTGATTAATGAAATTTTGACCATTTGA
TTTATTATTGGGGGGGTTAAATAGAGTGAAAAATGTATGTGTAGCACATT
CATACTGGAGGATCTCATTCTTTAAATTGTTTCTAATCAGTAAGATGTCT
AATAATGTGAAGGCCGTGTACTATTGGCTTCTTCTATATACAGTGCATTT
ATTAAAAAAGAAACTAGGATTATTCCTCTTGATCGAGTAGTTTCTTTTTA
TATCTTTTGTTCTTAAAGTTAAATGTGTAATTAAGCTTTTACTGGTTAAC
AGGTCGGCTTACAACTAAAAGTGATGTCTACAGCTTCGGAGTTGTTTTGC
TTGAACTATTGTCTGGGCGATGTGCTGTACATAAAACAAAAGTTGGTATT
GAGCAGAGTCTAGTAGACTGGGCAAAACCATATTTGTCTGACAAAAGGAA
ATTATTTCGCATCATGGACACCAAGTTGGGAGGCCAGTACCCCCAGAAAG
CAGCCCATACAGCTGCTACCCTTGCCTTACAGTGCTTAAATAACGAACCT
AAACTTAGGCCTCCGATGTCTGAAGTTTTAGCAATACAAGAGCGACTTGA
ACCCCCCAAAAATTCGCCAAACTCTCCCAGTCTGAACCAATAAGCCGACT
GGCCCATTTCCGTAAGCAAGTCCCCAATGAAGGAGCAACGTTCTCCCCTG
GATATAAACCCAACTGCCCCCCCCTTTGCCCTCCACCGGACAATCCCCAG
AAAAAAAAAAAACCGAAAAACATCTTTTTTGGAATTTTTTTAAAGGCCTT
CTTGCCATTTTTCCAAAAAACATATTGAAGGGGAGGTGTCCTTCGAGAGC
GGTTTTTAAGAAAAAAAAAAAGGAAAAAATTGCCAAAAGGCCCTTTTTTT
TTTCTCTTGGAGAAAAAATTTTTTTTTTCTCGGGCGTTAAAAATGTTAAA
CCAAAAACCCCC
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