DY306112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28 Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLK--DFVATTQSANF--QSEIAKLRHDVEEYAKQFP 535 P LQGGPHNHTI G++ AL A T E+ Y +V+ N + L +G ++++GGT+NH+LLV+L++ G+DG+ VE + +A+ I+ N+N + G+ S + P GIR+GT A+T+RGF E+ +V VKL + T G K+ D T A ++ LR V A+ +P Sbjct: 279 PMLQGGPHNHTIAGIASALLHAGTPEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKLC---REMTGGRKMSKADLHRVTSDARVMGSEQVLVLRRRVCALAEAYP 457
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_THEP1 (Serine hydroxymethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glyA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28 Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 388 PG+QGGP H I +V K+A T+E+K YQ+QV+ N K A+ + GY +VSGGT+ HL LV+L K I G EK LE+ I NKNT+P + S V GIR+GTPA+T+RG EE+ ++A D Sbjct: 254 PGIQGGPLMHVIAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMID 383
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_THEMA (Serine hydroxymethyltransferase OS=Thermotoga maritima GN=glyA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28 Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 388 PG+QGGP H I +V K+A T+E+K YQ+QV+ N K A+ + GY +VSGGT+ HL LV+L K I G EK LE+ I NKNT+P + S V GIR+GTPA+T+RG EE+ ++A D Sbjct: 254 PGIQGGPLMHVIAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMID 383
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_EUBR3 (Serine hydroxymethyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=glyA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28 Identity = 62/126 (49.21%), Postives = 82/126 (65.08%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 376 PG+QGGP H I +V K+A E+K YQ+Q++ N + L G ++VS GT+NHL+LV+L G+ G +EK+L+A HI ANKNT+P D V GIR+GTPA TSRG E+DF KVA Sbjct: 256 PGIQGGPLMHVIAAKAVCFKEALQPEFKEYQKQIVKNAQALCKGLQSRGIKIVSDGTDNHLMLVDLTPFGLTGKSIEKLLDAAHITANKNTIPNDPQKPFVTSGIRLGTPAATSRGLKEDDFDKVA 381
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28 Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEK 553 PGLQGGPHNHT ++VAL +A E++ Y ++ N + A+ LL G++LVSGGT+NHL+LV+L +KG+ G V + L+ I N NTVP D P GIR+GTPA+TSRG + ++A + D K E A Q ++ +V E K FPT G ++ Sbjct: 259 PGLQGGPHNHTTAAIAVALLEAMQPEFRDYARNIVANAAVLAEELLARGFDLVSGGTDNHLILVDLTSKGVAGKPVARALDRAGIELNYNTVPFDPRKPFDPSGIRLGTPAVTSRGMGPAEMRQIAAWIDEVTTAVAKGDEEA-------LAAVEQ---------RVAGEVRELTKNFPTPGLDR 427
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_XANCP (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28 Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 376 PG+QGGP H I +VA K+A E+K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A Sbjct: 258 PGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDCVDLA 383
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_XANCB (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28 Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 376 PG+QGGP H I +VA K+A E+K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A Sbjct: 258 PGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDCVDLA 383
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_XANC8 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28 Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 376 PG+QGGP H I +VA K+A E+K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A Sbjct: 258 PGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDCVDLA 383
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_THESQ (Serine hydroxymethyltransferase OS=Thermotoga sp. (strain RQ2) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28 Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 388 PG+QGGP H I +V K+A T+E+K YQ QV+ N K A+ + GY +VSGGT+ HL LV+L K I G EK LE+ I NKNT+P + S V GIR+GTPA+T+RG EE+ ++A D Sbjct: 254 PGIQGGPLMHVIAAKAVCFKEAMTEEFKEYQNQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMID 383
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYA_SYNAS (Serine hydroxymethyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=glyA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28 Identity = 62/126 (49.21%), Postives = 83/126 (65.87%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 376 PG+QGGP H I +VA K+A T E+K YQ Q++ N A+ L+ GY LVSGGT+NHLLL++L +KG+ G ++ L++ I NKN +P D MV GIR+GTPALTSRG EE+ +A Sbjct: 252 PGVQGGPLMHIIAAKAVAFKEALTDEFKDYQSQIVKNAQALAKELIGRGYRLVSGGTDNHLLLMDLTDKGLTGKEAQESLDSAGITVNKNGIPFDTRGPMVTSGIRIGTPALTSRGMKEEEMRTIA 377 The following BLAST results are available for this feature:
BLAST of DY306112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306112 ID=DY306112; Name=DY306112; organism=Citrus sinensis; type=EST; length=821bpback to top |