EY702752

Overview
NameEY702752
Unique NameEY702752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702752 vs. ExPASy Swiss-Prot
Match: B3GTA_ARATH (Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.448e-28
Identity = 80/216 (37.04%), Postives = 113/216 (52.31%), Query Frame = 2
Query:    8 SGMPQGEKRKMLEEAKGIIIRFLIGHSATSGGILDKAIDAEEKMHGDFLRLE-HIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARK*AIIPMFAIFTRLIVRFGKNLLSWVSFLWSRGVKYYEPEYWKFGEIGNKYFRPCYMATICSFKRLG-YIHINQTSIYYTNMQNEDVSLGSWFIG 649
            S MP+ +  K LEE +G++IRF+IG SA  G  LD+ ID E +   DFL LE H E   EL  K K +++ AV  WDAEFY+KVDD+V ++L  +   L + R++   Y+GCMKSG V+  +                               G ++YEPE+WKFG+    YFR    + +   K L  Y++IN  S        +D ++GSW IG
Sbjct:  140 SWMPRDDALKKLEE-RGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGMIALLESRRSQDGAYIGCMKSGDVITEE-------------------------------GSQWYEPEWWKFGD-DKSYFRHATGSLVILSKNLAQYVNIN--SGLLKTYAFDDTTIGSWMIG 320          
BLAST of EY702752 vs. ExPASy Swiss-Prot
Match: B3GTD_ARATH (Probable beta-1,3-galactosyltransferase 13 OS=Arabidopsis thaliana GN=B3GALT13 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.667e-16
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 2
Query:   17 PQGEKRKMLEEAKGIIIRFLIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPV 358
            P+G +R  LEE+ G+ IRF+IG +     +++  + +E  M+ DF+ L+  E Y +L  KT  +F  A +++D+EFY+K DDD+++    L + LA  R   + Y+GCMK GPV
Sbjct:  112 PEGLRR--LEESTGLAIRFIIGKTKDEAKMVE--LRSEVAMYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERGHSQTYLGCMKKGPV 221          
BLAST of EY702752 vs. ExPASy Swiss-Prot
Match: B3GTC_ARATH (Probable beta-1,3-galactosyltransferase 12 OS=Arabidopsis thaliana GN=B3GALT12 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.180e-14
Identity = 57/206 (27.67%), Postives = 93/206 (45.15%), Query Frame = 2
Query:   41 LEEAKGIIIRFLIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARK*AIIPMFAIFTRLIVRFGKNLLSWVSFLWSRGVKYYEPEYWKFGEIGNKYF----RPCYMATICSFKRLGYIHINQTSIYYTNMQNEDVSLGSWFI 646
            LE+A G+  RF+IG S  +  + +  ++ E K + DF+ L+  E Y+ L  KT  +F  A  +++A++Y+K DDD+++    L   LA  R   + Y+GCMK GPV+                                   +K+YE +      IGN+YF     P Y+ +      L         ++     NEDV++GSW +
Sbjct:  144 LEQATGLAFRFVIGKSKDAKKMAE--LEKEIKEYRDFVLLDTEEEYIRLPYKTLAFFKAAFKLFEADYYVKADDDIYLRPDRLATLLANERLHSQTYIGCMKKGPVIT-------------------------------DPKLKWYEKQ---GNLIGNEYFLHAYGPIYVLSAEIVASLAAARNGSLRMF----NNEDVTIGSWML 309          
BLAST of EY702752 vs. ExPASy Swiss-Prot
Match: B3GTE_ARATH (Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.541e-14
Identity = 42/114 (36.84%), Postives = 69/114 (60.53%), Query Frame = 2
Query:   17 PQGEKRKMLEEAKGIIIRFLIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPV 358
            P+G +R  LEE+ G+ IRF+IG + +   +     +  E  + DF+ L+  E Y +L  KT  +F  A +++D+EFY+K DDD+++    L + LA  R+  + Y+GC+K GPV
Sbjct:  114 PEGLRR--LEESTGLAIRFMIGKTKSEEKMAQLRREIAE--YDDFVLLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYLGCLKKGPV 223          
The following BLAST results are available for this feature:
BLAST of EY702752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
B3GTA_ARATH2.448e-2837.04Probable beta-1,3-galactosyltransferase 10 OS=Arab... [more]
B3GTD_ARATH3.667e-1638.60Probable beta-1,3-galactosyltransferase 13 OS=Arab... [more]
B3GTC_ARATH1.180e-1427.67Probable beta-1,3-galactosyltransferase 12 OS=Arab... [more]
B3GTE_ARATH1.541e-1436.84Probable beta-1,3-galactosyltransferase 14 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-H01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702752 ID=EY702752; Name=EY702752; organism=Citrus sinensis; type=EST; length=938bp
CCACGCGTCCGGGATGCCTCAAGGTGAGAAGAGAAAAATGCTGGAGGAAG
CGAAAGGCATCATCATACGTTTTCTGATAGGTCACAGTGCAACGTCAGGT
GGAATTCTTGATAAAGCCATTGATGCAGAGGAAAAGATGCATGGAGACTT
CTTGAGGCTGGAACATATAGAGGGCTACTTGGAATTGTCAGCCAAGACAA
AAACTTATTTTGCCACTGCTGTTTCCATGTGGGATGCAGAATTTTATATC
AAAGTTGATGACGATGTTCATGTAAATTTAGCAACACTTGGAATGACTCT
GGCTGCACATCGGACAAAACCTCGGGTTTACGTTGGTTGCATGAAGTCTG
GGCCTGTCCTTGCTAGAAAGTGAGCAATAATTCCTATGTTTGCTATATTT
ACTAGGCTAATTGTGAGATTTGGGAAAAATTTGCTTTCTTGGGTTTCTTT
TCTGTGGAGCAGAGGAGTAAAATACTATGAACCAGAGTACTGGAAATTTG
GTGAGATTGGAAACAAGTACTTCCGTCCATGCTACATGGCAACTATATGC
TCTTTCAAAAGACTTGGCTACATACATATCAATCAAACCAGCATCTACTA
CACAAATATGCAAAATGAAGATGTTTCTCTGGGATCCTGGTTTATTGGTT
TTAGATGTGGAGCATGTGGATGATAGAAGGCCTTTGGTGTGGAACCCCAC
CTGACTGGGAGTGGAAAGCTCACCTAAGGAAAACATGGGTTGGCAACCTT
TGATTGGAAATTCAGGGGCATTTGCAAGCTTGTGAAAGGGATTAAGAAGG
TCTTGACCTCTGGGGTGAAGGGAGGATCCTCTTGGGCTGCAATTTTCTGA
AAGGAACTGGTTGGTTTTTTTTTCCCCACCCGGGAAAACTCCTGGAGGAA
AAAACTTAAGATAGTTGTCCCTTTTCCACCCAGGCCTT
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