DY306108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_NITWN (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.704e-44 Identity = 89/177 (50.28%), Postives = 122/177 (68.93%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPL-KLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL+HMVAT I+DRPS R+PRG G G +P G PL IGKGRI+ +G ++A+L +G+ + +C AA+ L + +S T+ADARF KPLD DL +LA EH++LIT+EEGS+GGFGSHV L +G LDG L ++RSM+LPD ++DH +P +GL ++ I A V LG+ Sbjct: 482 ELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGSHVMQTLMDNGALDGGLVRVRSMILPDEFLDHDTPTAMYARAGLDAKGIVAKVFEALGK 656
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44 Identity = 90/175 (51.43%), Postives = 119/175 (68.00%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 526 EL+HMVATAA D+ P FR+PRG+G+G +P KG PL+IG+GR++ EG R+A+L +G+ + + +AA L ++ IS TVADARF KPLD DLI QLA HE LIT+EEG++GGFGSHV L +G+ D + RSMVLPD +IDH S +GL++ I L LG Sbjct: 457 ELVHMVATAAAHDEGPIAFRYPRGDGVGVEMPV--KGVPLQIGRGRVVSEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.028e-43 Identity = 92/176 (52.27%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL HMV TA D P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + C+LAA L++ +S TVADARF KPLD DLIRQLA HE+LITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV LGR Sbjct: 457 ELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.753e-43 Identity = 92/175 (52.57%), Postives = 117/175 (66.86%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 526 EL HMVATAA D P FR+PRG G G +P + LEIGKGRI+ EG RVA+L +G+ + + AA L ++ I+ TVADARF KPLD D+I LA +HE LIT+EEG+VGGFGSHV L+ + D LK RSMVLPD +ID SP D + + +++ HI A VL +LG Sbjct: 461 ELKHMVATAAAYDAGPIAFRYPRGEGEGVEMPEQPE--VLEIGKGRIIEEGSRVALLSFGTRLGEVRKAAEALAARGITPTVADARFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEAVFDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHIEAKVLDVLG 633
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.990e-43 Identity = 89/177 (50.28%), Postives = 119/177 (67.23%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL+HMVAT I+DRPS R+PRG G G +P G PL IGKGRI+ +G +VA+L G+ + +C AA+ L + +S T+ADARF KPLD DL+ +LA +H++LIT+EEGS+GGFGSHV L G LD G +++R+MVLPD ++DH +P GL R I A V LG+ Sbjct: 484 ELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_CAUSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter sp. (strain K31) GN=dxs PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.136e-42 Identity = 89/175 (50.86%), Postives = 119/175 (68.00%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 526 EL HMV+TA IDDRPS FR+PRG G+G +P + PLEIGKGRI+ EG VAI+ G+ + +C+ AA++L ++ +S TVADARF KPLD D++ +LA EHE +ITVEEG++GGFG+ V L G LD LK+R++VLPD + D P ++GL + I LS LG Sbjct: 455 ELAHMVSTAVAIDDRPSAFRYPRGEGLGLTIP--DLAAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADLLAARGLSATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALDRGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSALG 627
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.938e-42 Identity = 92/175 (52.57%), Postives = 114/175 (65.14%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 526 EL HMVATA DD P FRFPRG G G +P G LEIGKGRI+ EG RVAIL +G+ + + A L ++ I+ T+ADARF KPLD ++I L HE LITVEEG++GGFGSHV L+ G+ D K RSMVLPD +ID SPAD +G+++ I VLS+LG Sbjct: 461 ELKHMVATAVAHDDGPIAFRFPRGEGNGVDMP--EVGEVLEIGKGRIITEGTRVAILSFGTRLAEVQKAGEALAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.531e-42 Identity = 90/176 (51.14%), Postives = 116/176 (65.91%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL HMV TA D P FR+PRG G+G +P +G L IGKGRI+ EG +VA+L +G+ + C+LAA L + +S TVADARF KPLD DLIRQ A HE++ITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV LGR Sbjct: 457 ELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPV--RGEILRIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.306e-42 Identity = 89/176 (50.57%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL HMV TAA D P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + C+LA+ L++ +S TVADARF KPLD +L+RQLA HE+LITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV L R Sbjct: 457 ELKHMVRTAAAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAAGLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALRR 630
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.619e-42 Identity = 89/183 (48.63%), Postives = 122/183 (66.67%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 550 EL HMV TAA D P R+PRG G G +P +G LEIGKGR++ EG VAIL +G+ + Q + AA ML+++ +S TVADARFC+PLDTDLI +L H LIT+E+G++GGFG+ V H+L +G L+ +R+M LPD YIDHGSP + +GL++ I T L+ RP +++ I Sbjct: 458 ELCHMVVTAAAHDSGPIALRYPRGEGRGVEMP--ERGEVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDTALA-AARPSKSVRI 637 The following BLAST results are available for this feature:
BLAST of DY306108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 454
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306108 ID=DY306108; Name=DY306108; organism=Citrus sinensis; type=EST; length=846bpback to top |