EY702743

Overview
NameEY702743
Unique NameEY702743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP22_BOVIN (Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 67/228 (29.39%), Postives = 99/228 (43.42%), Query Frame = 2
Query:  131 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFYNK 685
            +  IF G L+S V  Q  +  S T+ PF  + LD+                       +     T+ D LR F+ PE+L    ++    +G  + ++S K  T+ K+ I+   HL RF + ++   K+   V FPL+L +     +  S E R                KY L A V H G   S GHYT+  R   DQW   DDA +T    + VL  + Y+LFY+K
Sbjct:  286 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESSVVNGESHVSGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIADVLDSEGYLLFYHK 508          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP16_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 16 OS=Schizosaccharomyces pombe GN=ubp16 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.880e-13
Identity = 57/189 (30.16%), Postives = 87/189 (46.03%), Query Frame = 2
Query:  125 SALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFYNK 685
            S +  IFGG L+  ++ +   K S T Q  L L +D    +   + D+L+ F   E L         N   +V A K + I     IL +H  RF++    S+K+ K + +P    LG   +  P+     YEL+  + H G     GHY +  +  N  WL FDD  V+     +VL+ QAY+L Y +
Sbjct:  245 SVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSS---LADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLG-PYMSDPNCSCW-YELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQYKR 428          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP22_HUMAN (Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 67/228 (29.39%), Postives = 98/228 (42.98%), Query Frame = 2
Query:  131 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFYNK 685
            +  IF G L+S V  Q  +  S T+ PF  + LD+                       +     T+ D LR F+ PE+L    ++    +G  + ++S K  T+ K+ I+   HL RF + ++   K+   V FPL+L +     +  S E R                KY L A V H G   S GHYT+  R   DQW   DDA +T      VL  + Y+LFY+K
Sbjct:  297 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHK 519          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP22_DANRE (Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 64/226 (28.32%), Postives = 92/226 (40.71%), Query Frame = 2
Query:  131 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFYNK 685
            +  IF G L+S V  Q  +  S T+ PF  + LD+                       +     T+ D LR F+ PE+L    +   +G      + K + ++ L  +   HL RF + ++   K+   V FPL+L +     +  S E R                KY L A V H G   S GHYT   R   DQW   DDA +T      VL  + Y+LFY+K
Sbjct:  278 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGDSHPSGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQGTLES-GHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHK 500          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UB22A_XENLA (Ubiquitin carboxyl-terminal hydrolase 22 A OS=Xenopus laevis GN=usp22-A PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 67/228 (29.39%), Postives = 98/228 (42.98%), Query Frame = 2
Query:  131 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI-----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL---HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----------------KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFYNK 685
            +  IF G L+S V  Q  +  S T+ PF  + LD+                       +     T+ D LR F+ PE+L    ++    +G  + ++S K  T+ K+ I+   HL RF + ++   K+   V FPL+L +     +  S E R                KY L A V H G   S GHYT+  R   DQW   DDA +T      VL  + Y+LFY+K
Sbjct:  295 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGESHVSGTTTLTDCLRRFTRPEHLGS--SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTP--FMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHK 517          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: U17L8_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8 OS=Homo sapiens GN=USP17L8 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 60/185 (32.43%), Postives = 87/185 (47.03%), Query Frame = 2
Query:  131 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            +  IFGG  +S +K    +  S T  P+L + LDI  +A  +++ AL     PE L G      G       A  ++ + T +K+LIL L RF        KL K+V++P  L + +  +   +     Y L A + H G     G+Y +  +    QW   DDA VTA   + VL  QAYVLFY
Sbjct:  193 IHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFC--DVTGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFY 372          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP36_DROSI (Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila simulans GN=Usp36 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 60/186 (32.26%), Postives = 85/186 (45.70%), Query Frame = 2
Query:  131 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            L  IFGG L+S V+    N  S T Q F  L LDI      ++EDA     + E LE       G    V+A K   ++     L + L RFS       KL K + F  ++ L +    +P+A+ +   Y LV+ VTH G     GHYTA        + +FDD+ V  I    V +  AY++F+
Sbjct:  203 LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDI--RKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS---MIGNKLTKQISFKPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPITMQNVCNTNAYIMFF 383          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP25_ARATH (Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 58/195 (29.74%), Postives = 97/195 (49.74%), Query Frame = 2
Query:  125 SALSDIFGGQLKSVVK-----AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFYNK 685
            S + +IFGG L+S VK     A+ NKA   +     + L+I   +  +++++L+ F   E L+G   YR  S     +VTA+K + I     IL++ L RF  G     K+ K++ F   LVL   +         +Y+L   + H G  P  GHY A  +    +W   +D+ V+     +VL ++AY+LF+++
Sbjct:  150 SVVKEIFGGALQSQVKCLSCGAESNKADEIMD----ISLEILQSS--SVKESLQKFFQSEILDGNNKYRCESCEK--LVTARKQMSILQAPNILVIQLKRF--GGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP21_HUMAN (Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 63/192 (32.81%), Postives = 88/192 (45.83%), Query Frame = 2
Query:  125 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            S + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E LE             T + K + +Q   +IL+LHL RFS       K    V FPLQ L LG     +  A    Y+L A   H G     GHYTA  R     W  ++D+ V+ + +++V   + YVLFY
Sbjct:  368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFY 555          
BLAST of EY702743 vs. ExPASy Swiss-Prot
Match: UBP21_BOVIN (Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 63/192 (32.81%), Postives = 88/192 (45.83%), Query Frame = 2
Query:  125 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGDSKVLHDQAYVLFY 679
            S + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E LE             T + K + +Q   +IL+LHL RFS       K    V FPLQ L LG     +  A    Y+L A   H G     GHYTA  R     W  ++D+ V+ + +++V   + YVLFY
Sbjct:  368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFY 555          
The following BLAST results are available for this feature:
BLAST of EY702743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
UBP22_BOVIN7.880e-1329.39Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos ta... [more]
UBP16_SCHPO7.880e-1330.16Probable ubiquitin carboxyl-terminal hydrolase 16 ... [more]
UBP22_HUMAN1.029e-1229.39Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo s... [more]
UBP22_DANRE1.029e-1228.32Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio ... [more]
UB22A_XENLA1.029e-1229.39Ubiquitin carboxyl-terminal hydrolase 22 A OS=Xeno... [more]
U17L8_HUMAN1.029e-1232.43Inactive ubiquitin carboxyl-terminal hydrolase 17-... [more]
UBP36_DROSI1.344e-1232.26Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosop... [more]
UBP25_ARATH1.344e-1229.74Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabid... [more]
UBP21_HUMAN1.344e-1232.81Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo s... [more]
UBP21_BOVIN1.344e-1232.81Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos ta... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-G04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702743 ID=EY702743; Name=EY702743; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGCTAGTATTAACGGAGCCAATACAGCTCTAGTCTCTTTGG
CAGAAGAAGATGAATGGGAAACAGTTGGCCCAAAGAACAAATCTGCAGTG
ACAAGAACACAGAGCTTCCTGCCTTCAGCACTTAGTGATATATTTGGAGG
ACAGCTGAAAAGCGTGGTGAAGGCACAAGGAAATAAAGCTTCTGCAACTG
TTCAGCCATTTCTCTTGCTCCACCTTGATATTTACTCTGAAGCTGTGCAT
ACAATTGAGGATGCTCTTCGTCTGTTTTCTGCTCCAGAAAATCTTGAGGG
ATACCGTACATCATCTACTGGAAATGCTGGTGTTGTGACTGCCAAAAAAT
CTGTCAAGATACAGACGCTTTCAAAGATTTTGATTTTACACCTGATGCGT
TTTAGTTATGGAAGCCAAGGGAGCACAAAGTTGCATAAATCTGTCCGTTT
TCCTCTTCAATTGGTTTTGGGTCGGGATCTGCTTGTTACTCCATCTGCTG
AGGGTCGAAAATATGAACTTGTTGCCACAGTTACCCACCATGGAAGAGAT
CCCTCGAAGGGGCATTATACTGCTGATGCTCGGTATTTTAATGACCAGTG
GCTCCATTTTGACGATGCCTCTGTGACTGCTATTGGGGACAGTAAGGTAT
TGCATGACCAGGCATACGTCCTTTTCTACAACAAGTTTAGAAAGGTGCAG
GATTNATAGTTTTCATGGGAGAAAAGAGCCATATCTGATGGATTCACCCC
ATGACAGTAGCTGAACTGTTTTTCTTAATTTTGAAGTAGTTTTTAAAATG
GTGGTATTGCATATGAAGGATATAACATTTTACTGATGGATATGAAAATG
AAATGAGTGGAAGTCCTGATAAAGTAATTAATGGAAACTCAATT
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