DY306054

Overview
NameDY306054
Unique NameDY306054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1338
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 9.883e-51
Identity = 97/238 (40.76%), Postives = 150/238 (63.03%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG   LN+N DN+F + EQ AF P  ++ G+
Sbjct:   90 MFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGL 324          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 9.883e-51
Identity = 97/238 (40.76%), Postives = 150/238 (63.03%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG   LN+N DN+F + EQ AF P  ++ G+
Sbjct:   90 MFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGL 324          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 9.883e-51
Identity = 97/238 (40.76%), Postives = 150/238 (63.03%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG   LN+N DN+F + EQ AF P  ++ G+
Sbjct:   90 MFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGL 324          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 2.876e-50
Identity = 99/238 (41.60%), Postives = 149/238 (62.61%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF RD   FP + H +K NPK+++   Q NW   DF++  PE+LH  + L  D G+P+ +R+M G G +TY + N  G+  +VKFH +   G++    +EA +V   +   + +DL+++I  GN+P+WK+YIQ+M  +       +P D+TK W +D  PL  VG   LN+N +N+F + EQ AF P  +V G+
Sbjct:   87 MFARFSTVAGERGAGDAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFPSLNHVVKRNPKTNMKDPQANW---DFWTLLPEALHQITILMTDRGIPKGFRNMHGFGSHTYSMYNDKGERFWVKFHHRTQQGIENYSAEEAEQVMAKDRDSSQRDLFNNIEQGNFPKWKMYIQVMTEEQARNHKDNPFDLTKVWYKDEYPLIEVGEFELNRNPENYFQDVEQAAFAPTNIVPGL 321          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 6.300e-50
Identity = 98/236 (41.53%), Postives = 144/236 (61.02%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            P++ RFSTV  E+G+ +  ++  GFA+KFYT +GN+DLVGNN PVFF+RD  KFPD +H  K +PK++++    + D++S  PESLH  + L  D G+P+   HM G G +TY   N AG+ ++VKFH+K   G K    +E   V G       + L+ +I  G +P W + +QIM     +K  ++P D+TK WP    P   +G + LN+N +N+FAE E  AF P+ +V GI
Sbjct:   87 PMLARFSTVAGEQGAADHERDVRGFALKFYTDEGNWDLVGNNTPVFFIRDPYKFPDFIHTQKRHPKTNLRSATAMWDYWSLSPESLHQVTILMSDRGLPQTPMHMNGYGSHTYSFWNDAGERYWVKFHFKTQQGHKFFTNEEGEAVIGKTREGYQESLFYAIENGEFPRWTVQVQIMPELDVEKTPYNPFDLTKVWPHADYPPVEIGVLELNRNPENYFAEIENAAFSPSNIVPGI 322          

HSP 2 Score: 22.3274 bits (46), Expect = 6.300e-50
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  738 QIQIFSYADTHK 773
            Q +IFSYAD H+
Sbjct:  331 QARIFSYADAHR 342          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 6.406e-50
Identity = 96/238 (40.34%), Postives = 149/238 (62.61%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++ A ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG   LN+N DN+F + EQ AF P  ++ G+
Sbjct:   90 MFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEVAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGL 324          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATR_ASPNG (Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.427e-49
Identity = 102/240 (42.50%), Postives = 146/240 (60.83%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQE----NWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            P+  RFSTV+  RGS +T ++  G A +FYT +GN+D+VG NF  FF++D ++FPD+VHA+KP P + I +    +    DFFS    +LH   +L    G+PR +RHM G GV+++  +   G +  V+  WK   GV  L+ DEA    G N  +  QDLY+++  G+YP+++L  QIMD     +F FD LD TK  PE+++P  P+G + LN N  N+FAE EQ  F P  VV GI
Sbjct:  138 PMFCRFSTVVGFRGSVDTARDVHGHACRFYTDEGNYDIVGINFAPFFIQDAIQFPDLVHAIKPMPNNEIPQAATAHTSAWDFFSQQSTALHSALWLMSGNGIPRSFRHMNGYGVHSFRFVAANGTSKVVRTPWKSQQGVASLVWDEAQAAAGKNSDYHRQDLYNAMPNGHYPKYELQAQIMDEADMLRFGFDLLDPTKLVPEEVVPYTPLGMMELNANPTNYFAEVEQAGFQPGHVVPGI 377          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATB_STAXY (Catalase B OS=Staphylococcus xylosus GN=katB PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 3.179e-49
Identity = 100/238 (42.02%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF RD   F  + HA+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+ YR+M G G +TY + N  G+  +VKFH +   G++ L  DEA K+   +   + +DL+++I   +YP+WK YIQ+M  +       +P D+TK W +   PL  VG   LN+N DN+F + EQ AF P  +V GI
Sbjct:   89 MFARFSTVAGERGAADAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFASLNHAVKRDPRTNMRSAQNNW---DFWTSLPEALHQVTILMSDRGIPKGYRNMHGFGSHTYSMYNDKGERVWVKFHHRTQQGIENLQPDEAAKIIADDRESSQRDLFEAIENKDYPKWKTYIQVMTEEQARNHKDNPFDLTKVWYKGDYPLIEVGEWELNRNPDNYFQDVEQAAFAPTNIVPGI 323          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 5.423e-49
Identity = 95/238 (39.92%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +   +  GFA+KFYT +GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VK H++   G++ L ++EA ++       + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG   LN+N DN+F + EQ+AF    ++ G+
Sbjct:   90 MFARFSTVAGERGAADAESDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKLHFRTQQGIENLTDEEAAEIIATGRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQVAFASTNIIPGL 324          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 7.083e-49
Identity = 97/238 (40.76%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            +  RFSTV  ERG+ +  ++  GFA+KFYT  GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N  G+  +VK+H++   G++ L ++EA  V   +   + +DL+++I  G+YP+WK+YIQ+M  +       +P D+TK W     PL  VG   LN+N +N+F + EQ AF P  +V G+
Sbjct:   90 MFARFSTVSGERGAADAERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENLTDEEAANVIATDRDSSQRDLFNAIENGDYPKWKMYIQVMTEEQARNHKDNPFDLTKVWYHGDYPLIEVGEFELNRNPNNYFQDVEQAAFAPTNIVPGL 324          
The following BLAST results are available for this feature:
BLAST of DY306054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_STAAB9.883e-5140.76Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA89.883e-5140.76Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA39.883e-5140.76Catalase OS=Staphylococcus aureus (strain USA300) ... [more]
CATA_STAXY2.876e-5041.60Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATA_RHIME6.300e-5041.53Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_STAAR6.406e-5040.34Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATR_ASPNG1.427e-4942.50Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1[more]
CATB_STAXY3.179e-4942.02Catalase B OS=Staphylococcus xylosus GN=katB PE=3 ... [more]
CATB_STAAA5.423e-4939.92Catalase-like protein OS=Staphylococcus aureus sub... [more]
CATA_STAWA7.083e-4940.76Catalase OS=Staphylococcus warneri GN=katA PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BF04RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306054 ID=DY306054; Name=DY306054; organism=Citrus sinensis; type=EST; length=1338bp
GCGCCTGTCATTGTCCGCTTCTCCACTGTTATCCATGAACGTGGCAGCCC
TGAAACCCTGAAAAATCCTCCAGGATTTGCGGTCAAGTTTTACACCAGAA
AGGGTAATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGT
GATGGAATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAA
GTCTCACATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATC
CTGAAAGCTTGCACATGTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCA
CGAGATTACAGGCACATGGAAGGATCTGGTGTTAACACTTACATGCTGAT
CAATAAGGCTGGGAAAGCACATTATGTGAAATTTCATTGGAAACCCACTT
GTGGGGTTAAGTGTTTATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCC
AACCACAGCCATGCTACTCAAGATCTTTATGACTCAATTGCAGCTGGAAA
CTATCCTGAGTGGAAACTCTACATCCAGATTATGGATCCCGACCATGAGG
ACAAATTTGACTTTGACCCACTTGATGTAACCAAGACCTGGCCTGAGGAC
ATCTTGCCCTTGCAACCTGTGGGCCGGGTGGGTTTGAACAAGAACATTGA
TAACTTCTTTGCAGAGAATGAACAGCTTGCTTTCTGCCCTGCTATTGTGG
TTTCTGGCATCTACTAATTCAAAGGATAAGTTGCTCCCAAATCCAAATCT
TCTCCTATGCTGATACTCACAAGGCACCCGCCAAGGGCCCAACTTACTTT
CAAACTTCCCAGTAAATGGCCACCCAATTGGTGTTAGCTACAACTTCCTT
TATAAAGTGTTTTTGAATTTCTTGGCCGGGGGATGAGGGAATTGATTATT
TCCCTTCAAAGAAATATAGAGTCGCCTTTGGTAAAAAGGCATCAACCCTT
CCCGAAAAACTCGCGGGGAAAGGGGCGGAGAATGCCATATCCTAAGGGAA
AACAATTCTACACAAATGGGAAAAAAAAAAGTATTTGGGGCACTGATGGG
CGAAAAAAGTCACACTCGAAAGGGATAGGGTTATATGTATTGAGTCATAC
CAAAGAACGCCCCCAAATGAGTATTGAACAGATCACTGCTCATTGACCTG
AGCAAAAAATGGACCAGTCATAGATATGAGACGTAATAAAAGCGCCCTCT
TCGTCTTCCAAAAAATTATTAGGCACAAACATAAACACAACAATAGGAAT
ATTATGTAAGAACACACTTTACAAATTATAATCAGTAATATGATATATAT
ATATACTTTATTCGAATAATAAAAAATTCACGTACATT
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