DY306054

Overview
NameDY306054
Unique NameDY306054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1338
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 4.426e-59
Identity = 111/232 (47.84%), Postives = 159/232 (68.53%), Query Frame = 1
Query:   16 RFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            RFSTV  ERGS + +++P GFA+K+YT +GN+DLVGNN PVFF+RD +KFPD +H  K +P++++  +  + DF+S+ PESL+  +++  D G+P+ +RHM+G G +T+ LIN  G+  +VKFH+    GVK L  +EA +V   +     +DL+++IA G++P+WKL IQ+M  +   K+ F P DVTK W     PL  VG V LNKN +N+FAE EQ AF PA VV GI
Sbjct:   93 RFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANVVPGI 324          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 4.426e-59
Identity = 110/232 (47.41%), Postives = 159/232 (68.53%), Query Frame = 1
Query:   16 RFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            RFSTV  E+GS + +++P GFA+K+YT +GN+DLVGNN PVFF+RD +KFPD +H  K +P++++     + DF+S+ PESL+  +++  D G+P+ +RHM+G G +T+ LIN  G+  +VKFH++   GVK L  +EA +V   +     +DL+D+IA G++P+WK+ IQ+M  +   K+ F P DVTK W     PL  VG V LNKN +N+FAE EQ AF PA VV GI
Sbjct:   93 RFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNPDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEVRKYDPDSNQRDLFDAIAGGDFPKWKMSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGI 324          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 5.781e-59
Identity = 111/240 (46.25%), Postives = 157/240 (65.42%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWR----IVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            PV +R STV   RGS +T+++  GFAVKFYT +GN+DLVGNN PVFF++D   FPD VHA+K  P++ +           DF    PES H   ++  D G+P   RH +G GV++Y  IN+ GK+ +VK HWKP  G   LL DEA K+ G +  +  +  ++ I +G++P+W+L  Q++D D + KFDFD LD TK  PE++ P+ P+GR+ +++N DNFFAE EQ+AFC + VV GI
Sbjct:  102 PVFIRISTVQGPRGSADTVRDVHGFAVKFYTDEGNYDLVGNNMPVFFIQDASSFPDFVHAVKMEPQNEMPTGGSAHDTFYDFCGLKPESAHSVLWVMSDRGIPISLRHQQGFGVHSYRFINQEGKSTFVKLHWKPLSGTCSLLWDEAQKIAGKDCDYHRRRFWEDIESGDFPQWELGAQLLDEDLQKKFDFDILDPTKLIPEELTPVIPLGRMVIDRNPDNFFAETEQVAFCVSHVVPGI 341          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 7.550e-59
Identity = 108/243 (44.44%), Postives = 157/243 (64.61%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQEN-------WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            PV VRFSTV   RGS +T ++  GFA +FYT +GNFD+VGNN PVFF++D ++FPD++H++KP+P + + +        W   DFFS  P +LH   +     G+PR YRHM+G G++T+ L+ + GK+  VK+HWK   G   L+ +EA  + G N     QDL+D+I +GN P W+L +Q++D D    + FD LD TK  PE+  PLQ +G + LN+N  N+FAE EQ++F P  +V G+
Sbjct:  135 PVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAW---DFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHWKTKQGKAALVWEEAQVLAGKNADFHRQDLWDAIESGNAPSWELAVQLIDEDKAQAYGFDLLDPTKFLPEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGHIVRGV 374          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.898e-58
Identity = 107/237 (45.15%), Postives = 154/237 (64.98%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVG-VPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            P++ RFSTV  ERG+P+T ++P GFA+KFYT +G FD+VGNN PVFF+RD  KFP  +H  K NP++ +++     D+ S + ES+H    LF D+G  P  YR M+G   +TY  +N  G+ +Y K+H+    G K L  +EA  + G+N  HA QDL+++I  G+YP W LY+Q+M P   +K+ ++  D+TK WP   +P+Q VGR  LN+N  NFFA+ EQ  F P+ +V GI
Sbjct:   93 PMVARFSTVGGERGTPDTARDPRGFALKFYTDEGIFDMVGNNTPVFFLRDPAKFPLFIHTQKRNPQNDMKDATMFWDYLSQNAESIHQVMILFSDLGGTPYSYRFMDGFSSHTYKFVNDKGEFYYCKWHFITNQGTKGLTNEEAAALDGSNPDHARQDLFEAIERGDYPSWTLYVQVMTPQEAEKYRYNIFDLTKVWPHKDVPMQRVGRFTLNQNPTNFFADIEQAGFSPSHMVPGI 329          

HSP 2 Score: 21.9422 bits (45), Expect = 1.898e-58
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  738 QIQIFSYADTHK 773
            Q++ FSY DTH+
Sbjct:  338 QVRTFSYPDTHR 349          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_STRCO (Catalase OS=Streptomyces coelicolor GN=katA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 2.197e-58
Identity = 107/235 (45.53%), Postives = 151/235 (64.26%), Query Frame = 1
Query:    7 VIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            V +RFSTV    G  + +++P GFA+KFYT +GN+DLVGNN PVFF++D +KFPD +H+ K +P +  QE   + DF++H PE+ H  ++L  D G+P  YRHM+G G +TY   N  G++ +VK+H+K   G++CL  DEA K+ G + +    DL  +I  G YP W L++Q+M       + F+P DVTK WP    PL+ VGR+ L++N DN FAE EQ AF P   V GI
Sbjct:   88 VFLRFSTVADSLGGADAVRDPRGFALKFYTEEGNYDLVGNNTPVFFIKDPIKFPDFIHSQKRDPFTGRQEPDNVFDFWAHSPEATHQITWLMGDRGIPASYRHMDGFGSHTYQWTNARGESFFVKYHFKTDQGIRCLTADEAAKLAGEDPTSHQTDLVQAIERGVYPSWTLHVQLMPVAEAANYRFNPFDVTKVWPHADYPLKRVGRLVLDRNPDNVFAEVEQAAFSPNNFVPGI 322          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.869e-58
Identity = 112/243 (46.09%), Postives = 155/243 (63.79%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQEN-------WRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            PV VRFSTV   RGS ++ ++  GFA + YT +GNFD+VGNN PVFF++D ++FPD++HA+KP P S I +        W   DFFS  P SLH   +     G+PR  RH++G GV+T+ L+   G +  VKF WK   G   L+ +EA  +GG N     QDL+D+I +G YPEW+L  Q+++   + KFDFD LD TK  PE+++P  P+G++ LN+N  N+FAE EQ+ F P  VV GI
Sbjct:  140 PVFVRFSTVAGSRGSVDSARDIHGFATRLYTDEGNFDIVGNNVPVFFIQDAIQFPDLIHAVKPQPDSEIPQAATAHDTAW---DFFSQQPSSLHALFWAMSGHGIPRSMRHVDGWGVHTFRLVTDEGNSTLVKFRWKTLQGRAGLVWEEAQALGGKNPDFHRQDLWDAIESGRYPEWELGFQLVNEADQSKFDFDLLDPTKIIPEELVPFTPIGKMVLNRNPKNYFAETEQIMFQPGHVVRGI 379          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.869e-58
Identity = 108/236 (45.76%), Postives = 152/236 (64.41%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            P+ +RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L  D G+P++YR   G G +TY  +N AG+  YVKFH+K   G+ C  + EA ++ G +   A +DL+ +I  G +P W L +Q+M       +  +P D+TK WP    PL  VG + LNKN +N+FAE EQ AF PA VV GI
Sbjct:   90 PLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGI 325          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.869e-58
Identity = 108/236 (45.76%), Postives = 152/236 (64.41%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            P+ +RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L  D G+P++YR   G G +TY  +N AG+  YVKFH+K   G+ C  + EA ++ G +   A +DL+ +I  G +P W L +Q+M       +  +P D+TK WP    PL  VG + LNKN +N+FAE EQ AF PA VV GI
Sbjct:   90 PLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGI 325          
BLAST of DY306054 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.869e-58
Identity = 108/236 (45.76%), Postives = 152/236 (64.41%), Query Frame = 1
Query:    4 PVIVRFSTVIHERGSPETLKNPPGFAVKFYTRKGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRVGLNKNIDNFFAENEQLAFCPAIVVSGI 711
            P+ +RFSTV  ERG+ +  ++  GFA+KFYT +GN+DLVGNN PVFF+RD +KFPD +H  K +PK++++      DF+S +PESLH  + L  D G+P++YR   G G +TY  +N AG+  YVKFH+K   G+ C  + EA ++ G +   A +DL+ +I  G +P W L +Q+M       +  +P D+TK WP    PL  VG + LNKN +N+FAE EQ AF PA VV GI
Sbjct:   90 PLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRESAQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGI 325          
The following BLAST results are available for this feature:
BLAST of DY306054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_HELPY4.426e-5947.84Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATA_HELPJ4.426e-5947.41Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATB_DICDI5.781e-5946.25Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CAT3_NEUCR7.550e-5944.44Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_SCHPO1.898e-5845.15Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
CATA_STRCO2.197e-5845.53Catalase OS=Streptomyces coelicolor GN=katA PE=3 S... [more]
CATB_AJECA2.869e-5846.09Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATA_BORPE2.869e-5845.76Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA2.869e-5845.76Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR2.869e-5845.76Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3BF04RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306054 ID=DY306054; Name=DY306054; organism=Citrus sinensis; type=EST; length=1338bp
GCGCCTGTCATTGTCCGCTTCTCCACTGTTATCCATGAACGTGGCAGCCC
TGAAACCCTGAAAAATCCTCCAGGATTTGCGGTCAAGTTTTACACCAGAA
AGGGTAATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGT
GATGGAATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAA
GTCTCACATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATC
CTGAAAGCTTGCACATGTTCTCCTTCTTGTTTGATGATGTGGGTGTCCCA
CGAGATTACAGGCACATGGAAGGATCTGGTGTTAACACTTACATGCTGAT
CAATAAGGCTGGGAAAGCACATTATGTGAAATTTCATTGGAAACCCACTT
GTGGGGTTAAGTGTTTATTGGAAGATGAGGCAATCAAGGTTGGAGGAGCC
AACCACAGCCATGCTACTCAAGATCTTTATGACTCAATTGCAGCTGGAAA
CTATCCTGAGTGGAAACTCTACATCCAGATTATGGATCCCGACCATGAGG
ACAAATTTGACTTTGACCCACTTGATGTAACCAAGACCTGGCCTGAGGAC
ATCTTGCCCTTGCAACCTGTGGGCCGGGTGGGTTTGAACAAGAACATTGA
TAACTTCTTTGCAGAGAATGAACAGCTTGCTTTCTGCCCTGCTATTGTGG
TTTCTGGCATCTACTAATTCAAAGGATAAGTTGCTCCCAAATCCAAATCT
TCTCCTATGCTGATACTCACAAGGCACCCGCCAAGGGCCCAACTTACTTT
CAAACTTCCCAGTAAATGGCCACCCAATTGGTGTTAGCTACAACTTCCTT
TATAAAGTGTTTTTGAATTTCTTGGCCGGGGGATGAGGGAATTGATTATT
TCCCTTCAAAGAAATATAGAGTCGCCTTTGGTAAAAAGGCATCAACCCTT
CCCGAAAAACTCGCGGGGAAAGGGGCGGAGAATGCCATATCCTAAGGGAA
AACAATTCTACACAAATGGGAAAAAAAAAAGTATTTGGGGCACTGATGGG
CGAAAAAAGTCACACTCGAAAGGGATAGGGTTATATGTATTGAGTCATAC
CAAAGAACGCCCCCAAATGAGTATTGAACAGATCACTGCTCATTGACCTG
AGCAAAAAATGGACCAGTCATAGATATGAGACGTAATAAAAGCGCCCTCT
TCGTCTTCCAAAAAATTATTAGGCACAAACATAAACACAACAATAGGAAT
ATTATGTAAGAACACACTTTACAAATTATAATCAGTAATATGATATATAT
ATATACTTTATTCGAATAATAAAAAATTCACGTACATT
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