DY306053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3_HUMAN (Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 2.258e-26 Identity = 78/236 (33.05%), Postives = 118/236 (50.00%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKF----------------------ESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAK--YKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL------PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E+FR FY K R+LT + +G+ +L F +R L V+T+Q + L+LFN+ ++ ++ EI + ++ + ++VR L SL+C K ++L KEP +K I F N +FT K+ R+KI R++ I+A+IVRIMKSRK + H LV E +QL F P IKKRIE LI R+YL R + ++ Y+A Sbjct: 533 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL4_SCHPO (Cullin-4 OS=Schizosaccharomyces pombe GN=cul4 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.049e-23 Identity = 67/206 (32.52%), Postives = 106/206 (51.46%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNS---SDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIP----LPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSN 597 ++ F +FY +K +K++W SLG C + +F EL ++ +QA LL FN+ + +SY ++ LSD D+ R L SLSCA+ + L P +K SP F N KFTDK+ R+KI R++ + ASIVR+MK ++ + H LV + + P +K IE L+ ++YLER+ ++ Sbjct: 523 LDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLEREDND 728
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL2_PONAB (Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.985e-23 Identity = 65/211 (30.81%), Postives = 105/211 (49.76%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 V++F FY RKLTW++ L T + + + +VTTYQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I F N F+ K + KI R+ + A+IVRIMK+RKVL H L+ E + Q F P IKK IE LI + Y+ER +++ + + Y+A Sbjct: 537 VQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL2_MOUSE (Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.985e-23 Identity = 65/211 (30.81%), Postives = 105/211 (49.76%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 V++F FY RKLTW++ L T + + + +VTTYQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I F N F+ K + KI R+ + A+IVRIMK+RKVL H L+ E + Q F P IKK IE LI + Y+ER +++ + + Y+A Sbjct: 537 VQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL2_HUMAN (Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.985e-23 Identity = 65/211 (30.81%), Postives = 105/211 (49.76%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 V++F FY RKLTW++ L T + + + +VTTYQ + LL FN+S+ +SY E+ +++ ++ + + SL K++N + + I F N F+ K + KI R+ + A+IVRIMK+RKVL H L+ E + Q F P IKK IE LI + Y+ER +++ + + Y+A Sbjct: 537 VQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_DROME (Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 6.362e-21 Identity = 68/214 (31.78%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLL---GKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 V F EFY + RKL W+Y + L+ + S T L +T+Q S LL FN + ++ ++++++L L K K+L N +++P E + +K RRI I P R+ I A+IVRIMK RK L H L+ E + QL FKP IKK I+ LI ++YLER + + + + YLA Sbjct: 563 VRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQIL--LKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.124e-20 Identity = 78/245 (31.84%), Postives = 110/245 (44.90%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFN---SSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPN--------------------------------TKTISPTDHFEFNSKFTDKMRRIKIP----LPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 EVF +FY +K + L W +L C L F EL V+ +Q L LFN LS+ +I L+ ++ + L SL +K IL ++ + TK I TD F FNSKF+ K+ +IK+ R+Y +DA+IVRIMK+RK L H L+ E V L F+P +KKRIE LI ++YL RD N ++ Y+A Sbjct: 560 EVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVSLFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSNTSSNTSSNTSSSASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLL--KFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.200e-19 Identity = 72/241 (29.88%), Postives = 109/241 (45.23%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKF------------------------ESRTTE---LIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYK---ILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPL-----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 E+F ++Y K RKLT LG ++ F + R E L V T+Q LL FN +R+S ++M +L + + ++ R L SL+ K ++ K I +D F N F K+ R+K+ + R+ ++A+IVRIMK+RK L H LV E +QL F P IK+RIE LI R+YL RD+ + ++Y+A Sbjct: 537 EMFTQYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.200e-19 Identity = 72/215 (33.49%), Postives = 104/215 (48.37%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTE---LIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEP--NTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXX----RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 ++F++FYQ + RKL W++ L L K+ + L +TYQ LL FN + L+ EI L D + L SL AK KIL +P + + I+ T F N +F +K +I I +P R+ I A+IVRIMK RK L H L+ E + QL F P IKK I+ LI ++YL R + + + Y+A Sbjct: 558 QLFQKFYQNQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSL--AKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDSIHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGKKDHYSYVA 770
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL4_CAEEL (Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 3.491e-19 Identity = 69/219 (31.51%), Postives = 108/219 (49.32%), Query Frame = 1 Query: 10 FREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTT-ELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCA--KYKILN--------KEPNTKTISPTDHFEFNSKFTDKMRRIKIPL----PPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 +++FY+ + +R + W + L + + F ELI T YQ LLLFN + + +EI+ + + +VV+ + +L K K+L K+ T + F NSKFT+K R++I R+Y IDA++VRIMK+RK L HQ L+ E ++QL F IKKR+E LI R+Y+ RD + + Y+A Sbjct: 624 YQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840 The following BLAST results are available for this feature:
BLAST of DY306053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306053 ID=DY306053; Name=DY306053; organism=Citrus sinensis; type=EST; length=1111bpback to top |