DY306053
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.955e-19 Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 10 FREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKIL---NKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+ D + ++ + D + ++L L +K +L N + + P + + +K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + QL FKP IKK I+ LI ++YLER + + YLA Sbjct: 566 FTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_MOUSE (Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.955e-19 Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 10 FREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKIL---NKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+ D + ++ + D + ++L L +K +L N + + P + + +K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + QL FKP IKK I+ LI ++YLER + + YLA Sbjct: 566 FTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_HUMAN (Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 5.955e-19 Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 10 FREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKIL---NKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 F FY ++ RKLTW+Y L L+ F++R T L +T+Q + LL +N+ D + ++ + D + ++L L +K +L N + + P + + +K R+ I +P R+ I A+IVRIMK RKVL HQQL+ E + QL FKP IKK I+ LI ++YLER + + YLA Sbjct: 566 FTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYT-LQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL2_DICDI (Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.016e-18 Identity = 63/243 (25.93%), Postives = 108/243 (44.44%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPN--------------------------------TKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 + F+++Y T+ + RKL W++ L F ++ + VT +Q LL+FN+ + +S EI NL+++++ R L SL AK I K+ + + S T + NS +++K ++K+ R+ + ASIVRIMK+RK + H L+ E +E F+P+ IKK IE LI ++Y+ R + + + Y A Sbjct: 529 ISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLIEAKILISKKKDQNSINNNNNNNNNNNNNGEGNNSLVDSANNMQPSSSSSSTQEYTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLYLQASIVRIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_CAEEL (Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.467e-17 Identity = 63/214 (29.44%), Postives = 96/214 (44.86%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDD----VVRLLHSLSCAKYKILNKE---PNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 +E+F +FY K R+LTW+YS + + TT Q +LLFN D + +I + + V L+ +L L KE P T T+S + N K + + + R+ I A IVRIMK+RK + HQQL+ E + QL FKP + IK+ I LI ++Y+ R + +++ YLA Sbjct: 568 IEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAY-MNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL1_SCHPO (Cullin-1 OS=Schizosaccharomyces pombe GN=cul1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.502e-17 Identity = 61/201 (30.35%), Postives = 96/201 (47.76%), Query Frame = 1 Query: 4 EVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIV---TTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLER 585 E F+ +Y + RKL+W++ L + + +T V +TYQ LLL+N D +Y E+ LS D + +L+ AK +L N K P ++ N F K R+++ LP R+ + ++IVRIMK+R+ L H LV E ++Q+ F P IK+ I+ LI ++YLER Sbjct: 559 EGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIFLKAKVLLLGD--NDKLGDPNSTYKINENFRMKKIRVQLNLPIRSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLER 757
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL2_CAEEL (Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 2.118e-16 Identity = 57/214 (26.64%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEPNTKTISPTDHFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXX-------RRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 ++ F +FY K RKLTW++++ ++ + + + YQ +ALL F D + +I ++ +S D +++ + ++ + + + ++ N T K + ++ P R+Y ++ +IVRIMK+RKVL H LV E ++Q F PD IKK IEDLI + Y++R N + ++YLA Sbjct: 568 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQN-DEYQYLA 776
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL5_DICDI (Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.373e-15 Identity = 60/220 (27.27%), Postives = 102/220 (46.36%), Query Frame = 1 Query: 1 VEVFREFYQTKTKHRKLTWIYSLGTCNLLGK-FESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILN-KEPNTKTISPTDHFEFNSKFTDKMRRIKIPLP--------PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLER---DKSNPNMFRYLA 621 + F FY+ + R LT++Y ++ + + + +L T YQ + LL+FN +D+++ I + L + + L L+ K I+ EP+ K + F NSKF+ K ++ + R + + A+IVRIMKS+K + H L +E Q+ + F P AIKK IE LI ++Y+ R D + + Y+A Sbjct: 533 ITYFESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGLDETSI--RLPLLALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYLIDQEYIRRTTDDNPSARKYEYMA 750
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL6_CAEEL (Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.381e-14 Identity = 62/211 (29.38%), Postives = 92/211 (43.60%), Query Frame = 1 Query: 10 FREFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDRLSYSEIMTQLNLSDDDVVRLLHSLSCAKYKILNKEP-NTKTISPTDHF-EFNSKFTDKMRRIKIPLP-----PXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 F FY R+L W YS + K + IVT Q L LFN D + +I + ++ ++ SL+ +L + N K P D N+K+ +K R+ + R+Y I A IVRIMK+RK L H L+ E + QL F P+ + IK IE LI + Y+ R ++ N++ YLA Sbjct: 519 FDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
BLAST of DY306053 vs. ExPASy Swiss-Prot
Match: CUL5_PONAB (Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 6.377e-13 Identity = 68/223 (30.49%), Postives = 99/223 (44.39%), Query Frame = 1 Query: 16 EFYQTKTKHRKLTWIYSLGTCNLLGKFESRTTELIVTTYQASALLLFNSSDR--LSYSEIMTQLNLSDDDVVRLLHSLSC---AKYKILNKEPNTKTISPTDH-----FEFNSKFT-------DKMRRI----KIPLPPXXXXXXXXXXXXXXRRYAIDASIVRIMKSRKVLGHQQLVLECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKSNPNMFRYLA 621 EFY+ RKL W + + + K E +L VTT+Q + L +N R +S+ + L D ++ R L SL K ++L EP SP D F N +F+ K +I ++ L R +I++IMK RK + + QL E VE L MF P K IK++IE LI Y+ RD+S+ N F Y+A Sbjct: 560 EFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVN--SPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780 The following BLAST results are available for this feature:
BLAST of DY306053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306053 ID=DY306053; Name=DY306053; organism=Citrus sinensis; type=EST; length=1111bpback to top |