DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_NICTO (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Nicotiana tomentosiformis GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_NICSY (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Nicotiana sylvestris GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_LEMMI (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Lemna minor GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ IL +T +F+ A DLI +++A+E SLC Y+++ ++ S EA KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFILTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDVRSNEATTKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_LACSA (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Lactuca sativa GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATIGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_GUIAB (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Guizotia abyssinica GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATIGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_DAUCA (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Daucus carota GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_CITSI (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Citrus sinensis GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_ATRBE (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Atropa belladonna GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C_TRACE (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Trachelium caeruleum GN=ndhB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 7.303e-11 Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q+L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E S C Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQVLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSFCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_GEMAT (NADH-quinone oxidoreductase subunit N OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=nuoN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.051e-11 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 3 Query: 429 DNFTYFCQILLLLSTAGTISMCFDFFEQERFDAF--EFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 D F + +++LL TA +++ E +R AF E L+LL++ M+ + A DL+ ++L +EL SL YV+A R+S S EA +KY +LGA SSG LL Sbjct: 86 DGFRWAVDLVILLGTA--LALMLLEAEHQRSAAFGPEVPSLMLLASTGMMVLAGARDLMFVFLGVELMSLAVYVLAGVNRRSARSAEAAVKYFLLGAISSGFLL 187 HSP 2 Score: 21.1718 bits (43), Expect = 9.051e-11 Identity = 5/20 (25.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQ 795 +G ++++G+TG+T + + Sbjct: 188 YGMALLFGATGSTRLQDITE 207 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |