DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_MARMM (NADH-quinone oxidoreductase subunit N OS=Maricaulis maris (strain MCS10) GN=nuoN PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.331e-17 Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 +N+ F D+ F + + L A + + + + E+ E+ VL++L+ M+ M+SA DLIAMY+ IELQSL YV+AA R S ++EAGLKY +LGA SSG+LL Sbjct: 68 FNDSFVFDSLARFSKTAIGLVAAIAMLLAMPYLQAEKLGKIEYPVLVVLAVTGMMMMVSANDLIAMYMGIELQSLALYVLAAFNRDSLRASEAGLKYFVLGALSSGLLL 176 HSP 2 Score: 21.9422 bits (45), Expect = 2.331e-17 Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHF 780 +G S++YG G+T F Sbjct: 177 YGASLVYGFAGSTGF 191
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_PELUB (NADH-quinone oxidoreductase subunit N OS=Pelagibacter ubique GN=nuoN PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.031e-17 Identity = 58/173 (33.53%), Postives = 84/173 (48.55%), Query Frame = 3 Query: 216 VFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 + PEIFI + LL+ GV Y SN+ LF N+ + DN + F +IL +L A +S+ + + + E+ VLIL S M+ MIS+ DL+ Y+ +ELQSL YV+A+ R S+E+GLKY +L A SSG+LL Sbjct: 7 ILPEIFISLSIMFLLLLGV---------YKKNSSNIVHNLAVGSLLITGILIFNNPLDQNISLF-NDGYVVDNLSSFMKILTILGGAFVLSISTRYLKIFKIFLIEYPVLILSSILGMMVMISSNDLMVFYIGLELQSLALYVLASFNRDQLKSSESGLKYFVLSALSSGLLL 169 HSP 2 Score: 30.4166 bits (67), Expect = 3.031e-17 Identity = 9/23 (39.13%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQILN 804 +GCS++YG +G+T+F+ + ++N Sbjct: 170 YGCSLVYGFSGSTNFNVIGDLMN 192
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2M_ACACA (NADH-ubiquinone oxidoreductase chain 2 OS=Acanthamoeba castellanii GN=ND2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.420e-16 Identity = 66/227 (29.07%), Postives = 104/227 (45.81%), Query Frame = 3 Query: 225 EIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL--VWLFHDLWVYWSYPLPSITPDFERITNHWCS----IYC*FYWGFSLFAVRSLFKI 887 EI+ + A LI V+ S K Y ++ G + + F+ D F + ++L+ + ++ FEFI+++ +S S L ++++ DLI+++ IELQSL FY++ ASK+ S FSTE+GLKY ILG FSSGI+L + L + SY ++ +TN + F GF L V LFK+ Sbjct: 37 EIYFLLALITFLIFFVILSNKKNYRSYYYLNVGGIFSNLLPFVVILLLIILNTNTNDSYYLFAGFYYNDAAVVFFKNIILIGFLIFTFAIKQYLSYFKYYDFEFILVLFISLFSSLLILNSNDLISLFFIIELQSLTFYILVASKQTSSFSTESGLKYFILGCFSSGIILFGISLIYGFTGLLSYTDLTLFLSEVYVTNFILDSSFFSFSGFLIGFLLLTVGFLFKL 263
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_THICR (NADH-quinone oxidoreductase subunit N OS=Thiomicrospira crunogena (strain XCL-2) GN=nuoN PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.191e-15 Identity = 48/180 (26.67%), Postives = 86/180 (47.78%), Query Frame = 3 Query: 207 FLAVFPEIFIINATFILLIHGVVFSTSKK----YDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F+ PEI ++ T +LLI ++S + Y ++ VG+ L ++ F RD F ++++++ + G ++ Q +F E+ L L M M+SAY+LI MYL +E+ SL Y + A ++ ++ + EA +KY +LGA ++G+LL Sbjct: 8 FIPAIPEIVLLTLTSLLLIADTIWSKRSEFATYYATQLILLVVGYLVLTSFSTSQV-------------LTFDGSFVRDAFGDILKLVIVVVSMGIFLFSKEYLLQNKFYRGEYFTLGLFGVLGMFVMVSAYNLITMYLGLEIMSLALYAMVAMRKDNQHALEAAMKYFVLGALATGMLL 174 HSP 2 Score: 29.261 bits (64), Expect = 1.191e-15 Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQIL 801 +G SMIYG+TG+ F ++ QI+ Sbjct: 175 YGFSMIYGATGSIQFDEMAQII 196
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_MAGSM (NADH-quinone oxidoreductase subunit N OS=Magnetococcus sp. (strain MC-1) GN=nuoN PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.612e-15 Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 + F D F F +++L LST + + + + E+ + E+ VL L + +FMIS+ + +YL IEL SL YV+AA KR S EAGLKY +LG+ +SGILL Sbjct: 69 FGGMFVNDRFAAFMKVMLYLSTLLPMVVSWVYLEKSKLGNGEYFVLTLFAMLGGMFMISSGSFLVLYLGIELLSLAIYVLAAYKRDDLASNEAGLKYFVLGSMASGILL 177 HSP 2 Score: 22.3274 bits (46), Expect = 2.612e-15 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHF 780 +G S+IYG TG+ F Sbjct: 178 YGISLIYGVTGSVDF 192
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON2_ACIBL (NADH-quinone oxidoreductase subunit N 2 OS=Acidobacteria bacterium (strain Ellin345) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-15 Identity = 37/110 (33.64%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 405 FWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 FW D+F+ F +L+ L TA + + F++ + +R + E+ +IL S M+ M SA +L+ +++A+E+ S+ YV+AA +R+ S E+ LKY +LG+F++ L Sbjct: 78 FWG-MVHVDSFSLFFHVLIALITAAVLLVSFEYMDVQRMRSGEYYAIILFSALGMMLMTSATELVLIFIALEISSIGSYVLAAMRRRVAESAESSLKYFLLGSFATAFFL 186 HSP 2 Score: 25.0238 bits (53), Expect = 5.729e-15 Identity = 8/29 (27.59%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 715 FPLEYYWFGCSMIYGSTGATHFHQLPQIL 801 F ++ +G ++I+G+TG+T+ + + L Sbjct: 180 FATAFFLYGVALIFGATGSTNVYTIAAAL 208
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_CAUSK (NADH-quinone oxidoreductase subunit N OS=Caulobacter sp. (strain K31) GN=nuoN PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.732e-15 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 +N + D + ++ + LS+A I + + FE+ VL++L+ M SA DLI++Y+ +ELQSL YV+AA +R S+EAGLKY +LGA SSG+LL Sbjct: 61 FNGVYAADAAATYAKVAIYLSSAVAIVLGDRWLAVRGDQKFEYAVLVILAAVGMGVTASAGDLISLYIGVELQSLALYVLAAFRRDDAKSSEAGLKYFVLGALSSGLLL 169 HSP 2 Score: 23.483 bits (49), Expect = 5.732e-15 Identity = 8/21 (38.10%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQI 798 +G S+IYG G+T F + + Sbjct: 170 YGASLIYGFAGSTRFADIAAV 190
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_SPHWW (NADH-quinone oxidoreductase subunit N OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=nuoN PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.857e-14 Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFD-AFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 ++ + D+F F ++L+ ++ A ++++ FF + E+ VLILLS M M+SA DL+ +Y+ +ELQSL YV+A+ R+ S EAGLKY +LGA +SGILL Sbjct: 64 FDGLYIADSFAAFAKLLIYIAAAVSVAVAPGFFSRTGGGYRAEYPVLILLSGVGMGMMVSAGDLLTLYVGLELQSLSAYVLASFMRRDTRSAEAGLKYFVLGALASGILL 173
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_GRABC (NADH-quinone oxidoreductase subunit N OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=nuoN PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.168e-14 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F D F ++L+L + + + D+ + FEF VL L ST M+ M+SA + + +Y+ +EL SL YV+AA R S EAGLKY +LG+ +SG+LL Sbjct: 63 FVADPFAVMVKLLILSGASIAVVLSLDYNRHHGMERFEFPVLTLFSTVGMMVMVSASNFMTLYMGLELMSLAIYVLAAFARDELRSAEAGLKYFVLGSLASGLLL 167
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_SALRD (NADH-quinone oxidoreductase subunit N OS=Salinibacter ruber (strain DSM 13855) GN=nuoN PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.137e-14 Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 3 Query: 423 RRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWLFHDLWVYWSYPLPSITPDFERITNHWCSIYC*FYWGFSLFAVRSLFKITA 893 R F F +++LL+ TI + + Q R+D E LI+ T M+ + SA ++++++L +E S+C YV+ R+ E + E+ LKY +LGAFS+G L + + LP++ S F+ GF+LF V FK++A Sbjct: 75 RTGGFVAFINLIILLTGLATILLSVPYLNQLRYDYGEVYALIMFCTVGMIMLGSANNMVSIFLGLETMSVCLYVLTGFIREDEGAVESALKYFLLGAFSTGFFLYGIALMYGATGTMALPAMA----AAELGTLSTRLLFWGGFALFLVGFFFKVSA 227 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |