DY305936

Overview
NameDY305936
Unique NameDY305936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1295
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_HIRBI (NADH-quinone oxidoreductase subunit N OS=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) GN=nuoN PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.858e-14
Identity = 34/78 (43.59%), Postives = 51/78 (65.38%), Query Frame = 3
Query:  501 FFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            +  +E  + FE+ +L++  +  M  M+SA +L+ +Y+ IE  SL  YV+AA  R S  S EAGLKY +LGA +SG+LL
Sbjct:   96 YLHRENMNKFEYTLLVMFGSAGMGVMLSANNLMTLYMGIETLSLSSYVLAAFNRDSRRSAEAGLKYFVLGALASGLLL 173          

HSP 2 Score: 28.4906 bits (62), Expect = 7.858e-14
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  736 FGCSMIYGSTGATHFHQL 789
            FGCS++YG TG   F Q+
Sbjct:  174 FGCSLVYGYTGFASFEQI 191          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_GEOLS (NADH-quinone oxidoreductase subunit N OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=nuoN PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.204e-13
Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 3
Query:  429 DNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            DNF  F +I+ LL+    + +   +  +E  +  E   +IL +T  M+ M +A DL+ ++L +EL S+  YV+A   R S  S EAG+KY +LGAFS+G LL
Sbjct:   78 DNFAIFFKIIFLLAAGLAVLISDQYMSREECNHGELYPIILFTTVGMMLMAAATDLMTIFLGLELMSISLYVLAGFNRDSIKSNEAGMKYFLLGAFSTGFLL 179          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON1_ACIBL (NADH-quinone oxidoreductase subunit N 1 OS=Acidobacteria bacterium (strain Ellin345) GN=nuoN1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.900e-13
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  429 DNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGI 728
            D F  +  +L ++  A  I M   + E E  D  E+  LIL +T  M+ M S  DLI +++ +EL +L  YV+    ++ + S EA LKYL+LGAFSSGI
Sbjct:   87 DRFAIYFYLLFIVGAAVAILMSIRYMEIEHEDHGEYHALILFATIGMMCMASGMDLILLFVGLELMALSTYVLVGFLKRDKRSNEAALKYLLLGAFSSGI 186          

HSP 2 Score: 21.9422 bits (45), Expect = 2.900e-13
Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  736 FGCSMIYGSTGATHFHQL 789
            +G S+ YG TG+T+  ++
Sbjct:  189 YGLSLFYGLTGSTNLTEI 206          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_GLUDA (NADH-quinone oxidoreductase subunit N OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=nuoN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.502e-13
Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            +N+ F  D+F  F +IL L   A    +   +    + + FEF VL+L ST   + M S+ +L+ +++ +EL SL  Y++ A  R      EAGLKY +LG+ +SG+LL
Sbjct:   59 YNHIFVNDDFARFMKILSLAGGAFATMLTVGYARNMKVERFEFPVLLLFSTLGAMMMASSENLMTLFIGLELSSLAIYILCAFARDEVRGGEAGLKYFVLGSLASGLLL 167          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_NITEU (NADH-quinone oxidoreductase subunit N OS=Nitrosomonas europaea GN=nuoN PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.264e-13
Identity = 36/109 (33.03%), Postives = 58/109 (53.21%), Query Frame = 3
Query:  408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            +   F  D  +   ++L+ ++ A  +     +         EF  L L +T  M+ M+SA  LI +YL +EL SL  Y + A +R+S  +TEA +K+ +LGA +SG LL
Sbjct:   66 FTGMFVGDAMSDILKLLIYVTVAAVLIYSRSYISTRGLLKGEFFSLALFATLGMMVMVSANHLITLYLGLELLSLSLYAMVALQRESAIATEAAIKFFVLGALASGFLL 174          

HSP 2 Score: 28.4906 bits (62), Expect = 8.264e-13
Identity = 10/26 (38.46%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  736 FGCSMIYGSTGATHFHQLPQILNG*Q 813
            +G SM+YG+TG  H  +L ++++  Q
Sbjct:  175 YGMSMLYGATGTLHLPELAKVIHSGQ 200          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON2_SYMTH (NADH-quinone oxidoreductase subunit N 2 OS=Symbiobacterium thermophilum GN=nuoN2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.019e-12
Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 3
Query:  405 FWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDA-FEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWLFHDLWVYWSYPLPSI 788
            FW      D FT+F   +LL   A  I +  D+  +    A  EF  +IL  T  M+FM+S+ DL+ +Y+ +EL S+  YV+A   RK   S EA LKY + GA +S +LL  L     V  S  LP +
Sbjct:   80 FWGGMIIADGFTFFMNGVLLGIAALVILLSADYVGKFLRGAHMEFYEIILAVTLGMMFMVSSRDLLTIYIGLELTSISSYVLAGILRKDAKSNEAALKYFLTGATASAVLLFGLSLIYGVTGSTRLPEV 208          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON2_RHIME (NADH-quinone oxidoreductase subunit N 2 OS=Rhizobium meliloti GN=nuoN2 PE=3 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 1.019e-12
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 3
Query:  420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            F  D F  F +++  L+T  T  +   + E E     E+ VL+L +   M+ M SA DL+++Y+ +EL  LC YV+    RK   S EA LKY+ILGA S+ I L
Sbjct:   71 FISDRFAVFFKLVFYLATILTFFLSRKYAEIEGIGRSEYYVLLLFALVGMMIMASAIDLLSIYVGLELMVLCTYVLTGFLRKERRSNEAALKYVILGAVSTAIFL 175          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON2_SOLUE (NADH-quinone oxidoreductase subunit N 2 OS=Solibacter usitatus (strain Ellin6076) GN=nuoN2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.738e-12
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 3
Query:  429 DNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            D F  F   + L++      + + + E       E+  LIL + C M F+ +  DLI +++ +EL +LCFYV+    R    S EA LKYL+LGAFSSG L+
Sbjct:   86 DGFAIFFNWIFLVAAVVVAIVSYKYLEISGEHHGEYYSLILFAQCGMYFLATGTDLITLFIGLELMALCFYVMVGFLRTERRSNEAALKYLLLGAFSSGFLV 187          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_DESHD (NADH-quinone oxidoreductase subunit N OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=nuoN PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.348e-12
Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 3
Query:  405 FWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            F    +  D F  F +IL L++    +    ++  + +    EF  L+LL+   M+ M  A DL+ MY+ +EL ++ FY++ A       S+EAG+KYL+LGA SS +LL
Sbjct:   64 FLQGMYMHDQFAGFFKILFLVAALLVVLSTKNYVAKFQAYRGEFYPLLLLAALGMMLMAGAGDLLTMYVGLELMTITFYILVAYHPNDPKSSEAGIKYLVLGAASSAVLL 173          

HSP 2 Score: 22.3274 bits (46), Expect = 2.348e-12
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  736 FGCSMIYGSTGAT 774
            +G S+IYG TG+T
Sbjct:  174 YGISLIYGLTGST 186          
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_HYPNA (NADH-quinone oxidoreductase subunit N OS=Hyphomonas neptunium (strain ATCC 15444) GN=nuoN PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.965e-12
Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 3
Query:  408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734
            +N   +   FT F +++        I +   F  +     +E+ +L++L++  M  ++SA +L+ +Y+ IE  SL  YV+AA  R S  S+EAGLKY +LGA +SGILL
Sbjct:   64 FNGLVKTTTFTNFTKVISFTLAGVAIFLSEGFLRRHEISRYEYPLLMVLASLGMGIILSANNLMTLYMGIETLSLSSYVLAAFHRDSARSSEAGLKYFVLGALASGILL 172          
The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
NUON_HIRBI7.858e-1443.59NADH-quinone oxidoreductase subunit N OS=Hirschia ... [more]
NUON_GEOLS1.204e-1339.22NADH-quinone oxidoreductase subunit N OS=Geobacter... [more]
NUON1_ACIBL2.900e-1340.00NADH-quinone oxidoreductase subunit N 1 OS=Acidoba... [more]
NUON_GLUDA3.502e-1335.78NADH-quinone oxidoreductase subunit N OS=Gluconace... [more]
NUON_NITEU8.264e-1333.03NADH-quinone oxidoreductase subunit N OS=Nitrosomo... [more]
NUON2_SYMTH1.019e-1237.21NADH-quinone oxidoreductase subunit N 2 OS=Symbiob... [more]
NUON2_RHIME1.019e-1239.05NADH-quinone oxidoreductase subunit N 2 OS=Rhizobi... [more]
NUON2_SOLUE1.738e-1237.25NADH-quinone oxidoreductase subunit N 2 OS=Solibac... [more]
NUON_DESHD2.348e-1234.55NADH-quinone oxidoreductase subunit N OS=Desulfito... [more]
NUON_HYPNA2.965e-1235.78NADH-quinone oxidoreductase subunit N OS=Hyphomona... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DG09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bp
GTCTACATTCAATTCTTTATTGAGCCTGGTGTGGAATCACCATCATTACA
CATTCATTGTTGATTTGGCTGCTGGTCTAGCGATCCTTCCTAGCCGCCGC
CTAGAGTGCAGCCTGCTTGCTGAAGACCGTAACGTAAGTAACTCAGTGCT
CCATACGGGGGAAATGAAAGCAGAATTCGTTCGGATCCTCCCACATGTTC
AATCTTTTTTTAGCGGTTTTTCCAGAGATCTTTATCATTAATGCAACCTT
TATTTTGCTCATTCATGGAGTTGTATTTAGTACCTCTAAGAAATATGATT
ATCCGCCGTTAGTCAGTAATGTGGGTTGGCTTGGATTACTTAGTGTTCTA
ATAACCTTGCTTCTGCTCGCCGCTGGCGCACCTCTCCTAACTATTGCCCA
TTTATTCTGGAATAATTTTTTTAGGAGGGACAATTTTACATATTTTTGCC
AAATCCTTCTATTATTAAGTACGGCTGGTACCATTTCGATGTGTTTTGAT
TTTTTCGAACAAGAGAGGTTTGATGCTTTTGAATTCATTGTATTAATTCT
ACTTTCTACTTGCAGTATGCTCTTTATGATCTCGGCTTATGATTTAATTG
CCATGTATTTAGCTATTGAGCTTCAAAGTTTATGTTTTTATGTAATCGCA
GCATCAAAAAGAAAGTCTGAATTTTCCACGGAAGCCGGCTTGAAATATTT
GATCTTAGGTGCATTTTCCTCTGGAATATTATTGGTTTGGTTGTTCCATG
ATCTATGGGTCTACTGGAGCTACCCACTTCCATCAATTACCCCAGATTTT
GAACGGATAACAAATCACTGGTGCTCGATCTATTGTTAATTTTATTGGGG
ATTCTCTTTATTCGCTGTAAGATCCCTATTCAAAATCACTGCCAATTCCC
TTTTCGGGCGGCTGTGAGGAAGAACGGCCCCTTATAAGTGGGGAAAGGGT
AAGGGGTGGGTGGGTACCACCCAAAATTAAAAAAAACCACACAAAATCTC
TTTGTGGGGGTCCGGGCCATCCCGGTCTCGCAGAATTAGGAATTATTTTG
TCAGTTCTATGTGATGAGTCATAATATACAAAGACGCGGGAATCAGCGTA
AAAAAAATCCATGGTTGTTGATGTCGTAATAGACNGACCATNGAAAGNGA
CAACAAGCTCTAATGTAGCAAGCTCGTCATTCAGACACAAGACTGAAGCA
TAAGAAACCACCTCAGACCATACGCATGTTGCGAGCGACGCTTCCAACCC
CAAANACGNGTCATAATGACGTGCGACGTTACGCATCCTCTGACT
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