DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_LEPIN (NADH-quinone oxidoreductase subunit N OS=Leptospira interrogans GN=nuoN PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.058e-12 Identity = 33/100 (33.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 438 TYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV 737 +++ ++ + GT ++ + + + EF L+L +TC M M + D I +++A+EL S+C Y++ R FS EA LKY +LG+FSSG +L+ Sbjct: 99 SFWLNLIYISMAIGTAAIVPRILKNHKIEFPEFYPLLLFATCGMTLMTTGQDFILVFVALELMSICLYILIGMARSDLFSLEATLKYFLLGSFSSGFMLM 198
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_EHRCJ (NADH-quinone oxidoreductase subunit N OS=Ehrlichia canis (strain Jake) GN=nuoN PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.058e-12 Identity = 46/179 (25.70%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 198 FNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 +N F+ + PE+F+++++ ILL+ G+V + K L+S + L +N + D + +I++LLS++ S+ F + +EF ++IL + ++ +I+A L++ YL+ E+QS+ Y + + + S+E+G+KY +L A SS I+L Sbjct: 3 WNNFVYIIPEVFLVSSSLILLLLGIVLN-KKVIHVLSLISLL-----------VTVGIVGINLEIEPQLIFNGLLKSDLYISIAKIIILLSSS---SVLFMLLVSGKEYCYEFSIMILFAVFGLITLIAANSLLSFYLSFEIQSITLYALTCFDKSAIKSSESGIKYFVLSALSSCIML 166
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_LOTJA (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Lotus japonicus GN=ndhB2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.058e-12 Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LLS+ I + ++ E EF++ +L +T +F+ SA DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_LOTJA (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Lotus japonicus GN=ndhB1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.058e-12 Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LLS+ I + ++ E EF++ +L +T +F+ SA DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLSSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCSANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON1_THEYD (NADH-quinone oxidoreductase subunit N 1 OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=nuoN1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.605e-12 Identity = 47/160 (29.38%), Postives = 82/160 (51.25%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWLFHDLWVYWSYPLPSITPDFERITNHWCSIYC*FYWGFSLFAVRSLFKI 887 +N F D T + ++++++ T ++ + + +++ E I IL S M+ ++SA +LI+ +L+ EL SL YV+ +R S EA +KY +LG FSS I+ LF ++Y + ++ + I+N+ I G LF V FKI Sbjct: 62 FNGMFLNDFLTIYLKLIIIIGTIISLLVLTSYLKEKLIRFNESIAFILFSALGMMLLVSARELISFFLSFELMSLSIYVLVGIRRYDVKSNEAAVKYFMLGGFSSAIM---LFGIAFIYGATNTTELSLILKVISNYNPLILI----GLGLFIVGLCFKI 214
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_AZOSB (NADH-quinone oxidoreductase subunit N OS=Azoarcus sp. (strain BH72) GN=nuoN PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.676e-12 Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 ++N F D ++L+ S A + + + D E+ VL LL T M+ M+++ L++MY+ +EL SL Y + A R S TEA +KY +LGA +SG+LL Sbjct: 66 FSNMFIGDLLGDVLKLLIYFSMAVALLYGRSYLADRKLDKPEYYVLALLMTLGMMVMVTSNHLLSMYIGLELMSLSLYALVAFDRDSARGTEAAMKYFVLGALASGLLL 174 HSP 2 Score: 21.557 bits (44), Expect = 6.676e-12 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 736 FGCSMIYGSTG 768 +G SM+YG+TG Sbjct: 175 YGMSMLYGATG 185
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_DECAR (NADH-quinone oxidoreductase subunit N OS=Dechloromonas aromatica (strain RCB) GN=nuoN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 8.665e-12 Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 435 FTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F Y ++++ + G + ++E + E+ VL L +T M+ MISA + +Y+ +EL SL Y + A R S STEA +KY +LGA +SG+LL Sbjct: 84 FLYMTVVIVMFYSRGYV------IDRESMNKGEYYVLALFATLGMMVMISANHFLTIYIGLELLSLSLYAMVAMNRDSVVSTEAAMKYFVLGALASGLLL 177 HSP 2 Score: 23.483 bits (49), Expect = 8.665e-12 Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQILNG 807 +G SMIYG+TG + + L G Sbjct: 178 YGMSMIYGATGTLEITGIAERLYG 201
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C_STAPU (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Staurastrum punctulatum GN=ndhB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.127e-11 Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ D FT + LL LS+A I + ++ + EF++L+L +T +F+ A DL+ +++++E SL Y++A +K S EA LKYL++G SS IL+ WL+ Sbjct: 74 FQVDGFTIAFRCLLTLSSALCIPLSTEYIRRSGMTQAEFLILLLTATLGGMFLCGANDLVTIFVSLECLSLSSYLLAGQAKKDIRSNEASLKYLLMGGASSSILVYGFSWLY 185
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C_CYAP8 (NAD(P)H-quinone oxidoreductase subunit 2 OS=Cyanothece sp. (strain PCC 8801) GN=ndhB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.127e-11 Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 414 NFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 N F DN + + ++ LSTA TI M + EQ EFI ++L +T +F+ A +L+ +++++E+ S+ Y++ ++ S EA LKYL++GA SS I L Sbjct: 73 NSFNSDNLSIVFRAIIALSTAVTILMSIRYVEQTGTSLAEFIAIMLTATLGGMFLCGANELVMIFISLEMLSISSYLMTGYMKRDPRSNEAALKYLLIGASSSAIFL 179
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_TOBAC (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Nicotiana tabacum GN=ndhB2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.127e-11 Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLY 202 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |