DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_ARATH (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Arabidopsis thaliana GN=ndhB2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.127e-11 Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ IL +T +F+ A DLI +++A+E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFILTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDIRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_TOBAC (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Nicotiana tabacum GN=ndhB1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.127e-11 Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_ARATH (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Arabidopsis thaliana GN=ndhB1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.127e-11 Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ IL +T +F+ A DLI +++A+E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFILTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDIRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_XANC5 (NADH-quinone oxidoreductase subunit N OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=nuoN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.461e-11 Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 +N F RD + +++L + ++ + + + E VL+L +T M+ + SA L+ +YL +EL +LC Y + AS R + +TEA +KY +LG+ +SG+LL Sbjct: 72 FNGMFVRDTAADVMKTVIVLVSGLSLVYGWTYLRERNLYQGEIPVLVLFATAGMMLLASAGSLLMVYLGLELLALCSYALVASNRDNGLATEAAMKYFVLGSLASGLLL 180 HSP 2 Score: 21.1718 bits (43), Expect = 1.461e-11 Identity = 7/24 (29.17%), Postives = 13/24 (54.17%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQILNG 807 +G S++YG+TG + + G Sbjct: 181 YGMSLVYGATGTLSLAGIHDAIEG 204
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_COXBU (NADH-quinone oxidoreductase subunit N OS=Coxiella burnetii GN=nuoN PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.472e-11 Identity = 45/176 (25.57%), Postives = 83/176 (47.16%), Query Frame = 3 Query: 207 FLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWXXXXXXXXXXXXXXXXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F+ PE+F++ ++L+ GV K++ P ++ + H + F D F+ + ++ + LS ++ ++ + EF VL LLS M+ ++S+ +L+ ++L +EL SL Y + A R S EAG+KY ++GA +SG+LL Sbjct: 8 FIPAVPEMFVLFMALVILLAGVFIK--KRHQIPYYLTQITLILVAGLTWYIFTYSDFAETSFTFH----HMFVLDRFSVYLKLFIYLSVFFAFIYAREYNDERKIPHTEFYVLGLLSMLGMVALVSSSNLLTVFLGLELLSLPTYAMVALYRNKTRSVEAGMKYFVIGAIASGMLL 177
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON2_ROSCS (NADH-quinone oxidoreductase subunit N 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.895e-11 Identity = 33/109 (30.28%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 ++ R D+++ L L + A T+ + D+ ++ + E+ VL+L +T M+ + DLI ++L +EL S+ YV+ S EAG+KYL++GAF+ G ++ Sbjct: 74 FSGMLRLDSYSLTLNWLFLAAAAITMVLSLDYLPRQGIERSEYYVLVLFATGGMMLLAQGADLIILFLGLELLSIVLYVLTGFAYPRNASEEAGMKYLLIGAFAGGFVV 182 HSP 2 Score: 22.3274 bits (46), Expect = 1.895e-11 Identity = 7/22 (31.82%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQIL 801 FG +++YG+TG+ + + + L Sbjct: 183 FGIALLYGATGSMNLRAIGETL 204
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_LEGPL (NADH-quinone oxidoreductase subunit N OS=Legionella pneumophila (strain Lens) GN=nuoN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.897e-11 Identity = 32/111 (28.83%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 402 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 L +N F D+ ++ ++ + ++ + ++ ++ + ++ VL L ST M+ ++SA+ L+ +YL +EL SL Y + A +R ++EA +KY ++GA +SG+LL Sbjct: 64 LIFNKLFISDDISHLMKLFIDITVLLSFVYSQNYLDERQMPTGDYYVLGLFSTLGMMILVSAHSLLTLYLGLELMSLPLYAMTAIRRTDSDASEAAMKYFVMGAIASGMLL 174 HSP 2 Score: 20.7866 bits (42), Expect = 1.897e-11 Identity = 6/11 (54.55%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 736 FGCSMIYGSTG 768 +G S++YG+TG Sbjct: 175 YGISLVYGATG 185
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_SACHY (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Saccharum hybrid GN=ndhB2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.922e-11 Identity = 37/112 (33.04%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL++ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVLGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_SACHY (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Saccharum hybrid GN=ndhB1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.922e-11 Identity = 37/112 (33.04%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL++ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVLGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_BORA1 (NADH-quinone oxidoreductase subunit N OS=Bordetella avium (strain 197N) GN=nuoN PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 2.461e-11 Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 408 WNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFE-QERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 +N + D+F++ +I ++ A T+ + + ++ E VL LL+ + MISA L+++YL +EL SL Y + A +R +TEA +KY +LGA +SG LL Sbjct: 67 FNGMYVTDSFSHLLKITSYIAVAVTLIYGRVYAQSRDMLRGGELYVLTLLALLGQMVMISAGSLVSVYLGLELMSLALYALIALRRDDVVATEAAMKYFVLGALASGFLL 176 HSP 2 Score: 24.6386 bits (52), Expect = 2.461e-11 Identity = 9/26 (34.62%), Postives = 16/26 (61.54%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQILNG*Q 813 +G SM+YGSTG ++ +++ Q Sbjct: 177 YGMSMVYGSTGHLDLAEISRVIGSGQ 202 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |