DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_MOOTA (NADH-quinone oxidoreductase subunit N OS=Moorella thermoacetica (strain ATCC 39073) GN=nuoN PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.510e-11 Identity = 36/105 (34.29%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 429 DNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLVWL 743 D F + +IL L++ T + +D+ E+ + E+ L++L+T M+ + S+ +L+++YL +EL ++ F ++AA S EAG+KY++LGA SS I L L Sbjct: 67 DPFGTYFKILFLVAAMLTAACSYDYVEKMGLNQGEYYALLVLATLGMMVLASSGELVSLYLGLELMTITFCILAAFHLGDAKSAEAGIKYVLLGAMSSAIFLYGL 171
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON1_HERA2 (NADH-quinone oxidoreductase subunit N 1 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=nuoN1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.510e-11 Identity = 34/102 (33.33%), Postives = 57/102 (55.88%), Query Frame = 3 Query: 429 DNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 D F +LL TA T+ + FD+ ++ EF L+L +T MLF++ + DL+ +++ +E S+ YV+ S EA +KYL+LG F++G L+ Sbjct: 75 DKFGVLVNWILLAGTALTLLIAFDYMPRQNLSQGEFYPLVLFATSGMLFLVQSTDLVTIFIGVETLSIALYVLTGFAVPQFKSGEAAIKYLLLGGFAAGFLV 176
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C_PHYPA (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Physcomitrella patens GN=ndhB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.510e-11 Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGIL---LVWLF 746 F+ DNF +I + L + I + DF + + EF++ +L +T +F+ A DLI +++++E SLC Y+++ +K S EA +KYL++G SS IL WL+ Sbjct: 74 FQADNFNKIFRIFIALCSILCIPLSIDFIKCTKLAITEFLIFLLTATIGGMFLCGANDLITIFVSLECLSLCSYLLSGYTKKDVRSNEAVMKYLLIGGTSSSILAYGFSWLY 185
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_SOYBN (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Glycine max GN=ndhB2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.510e-11 Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ IL +T +F+ A DLI +++A+E SLC Y+++ +K S EA KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFILTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_SOYBN (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Glycine max GN=ndhB1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.510e-11 Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ IL +T +F+ A DLI +++A+E SLC Y+++ +K S EA KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFILTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON2_THEYD (NADH-quinone oxidoreductase subunit N 2 OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 405 FWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F + + D + +IL+L I + + + + + E++ L+LLS M MI A DL+ +YLA+E SL Y++A RK S EAG+KY ILG SS ILL Sbjct: 57 FTSELIKIDLYRQTLRILVLFIGVFIIGLSYSDLKLKSSKSVEYVFLLLLSLFGMNLMIVANDLLILYLALETFSLSLYILAGFYRKESLSIEAGMKYFILGTLSSIILL 166
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_ORYSJ (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhB2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_ORYSI (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oryza sativa subsp. indica GN=ndhB2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_ORYSA (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oryza sativa GN=ndhB2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_MAIZE (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Zea mays GN=ndhB2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |