DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_HORVU (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Hordeum vulgare GN=ndhB2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_ORYSJ (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhB1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_ORYSI (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Oryza sativa subsp. indica GN=ndhB1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_ORYSA (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Oryza sativa GN=ndhB1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_MAIZE (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Zea mays GN=ndhB1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_HORVU (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Hordeum vulgare GN=ndhB1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.278e-11 Identity = 37/112 (33.04%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILLV---WLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A+E SLC Y+++ ++ S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_CHLSY (NADH-quinone oxidoreductase subunit N OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=nuoN PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.282e-11 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F D+ T ++L++ + T +C D + EF LI+ +T M M+ A +L+ YLAIEL S+ Y++A R S EAGLKY + GA SS ILL Sbjct: 101 FATDHLTMIARLLIIGAALVTSLLCLDI--RPNAHPGEFYALIIFATLGMCLMVGANELLLAYLAIELTSIPLYLLAGYFRNDPRSAEAGLKYFLFGAISSAILL 203
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_OENPA (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oenothera parviflora GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.282e-11 Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 402 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 LF NF + +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 86 LFSGNF-QTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_OENGL (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oenothera glazioviana GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.282e-11 Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 402 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 LF NF + +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 86 LFSGNF-QTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_OENEH (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.282e-11 Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 402 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 LF NF + +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 86 LFSGNF-QTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |