DY305936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C1_EUCGG (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhB1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.282e-11 Identity = 38/118 (32.20%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 402 LFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 + ++ F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 85 IIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NUON_FLAPJ (NADH-quinone oxidoreductase subunit N OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=nuoN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.396e-11 Identity = 31/110 (28.18%), Postives = 65/110 (59.09%), Query Frame = 3 Query: 405 FWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 ++NN D F+ L ++ T +++ +F+++++ +++ + + + M+S +L +L IE+ S+ Y++AAS R + S EAG+KY ++G+F+SGI+L Sbjct: 51 YYNNMMVVDKFSVAFSSLFIIITVFLVALSHEFYKEQKTKISDYVGIKVFLLSGAVAMVSFGNLSMFFLGIEVLSISLYILAASNRLNLKSNEAGMKYFLMGSFASGIIL 160 HSP 2 Score: 22.7126 bits (47), Expect = 5.396e-11 Identity = 8/23 (34.78%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 736 FGCSMIYGSTGATHFHQLPQILN 804 FG +IYG+TG+ +++ ++N Sbjct: 161 FGICLIYGATGSFDLNKILILIN 183
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2M_METSE (NADH-ubiquinone oxidoreductase chain 2 OS=Metridium senile GN=ND2 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 5.425e-11 Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 540 VLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 VL+L+ + ++SA + +++YLAIEL +L +++ A KR S FS EAGLKY +LGA +SG+ L Sbjct: 13 VLVLMVALGSILLVSASNWLSVYLAIELPTLSLFILVAQKRGSGFSAEAGLKYFVLGALASGLFL 77 HSP 2 Score: 24.2534 bits (51), Expect = 5.425e-11 Identity = 9/25 (36.00%), Postives = 15/25 (60.00%), Query Frame = 1 Query: 730 YWFGCSMIYGSTGATHFHQLPQILN 804 + FGC+++ G TG T + +LN Sbjct: 76 FLFGCALLCGLTGGTSIPCIDLVLN 100
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C_MICAN (NAD(P)H-quinone oxidoreductase subunit 2 OS=Microcystis aeruginosa (strain NIES-843) GN=ndhB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 34/105 (32.38%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 734 F DN + + ++ LSTA T+ M + EQ EF+ ++L +T +F+ A +L+ +++++E+ S+ Y++ ++ S EA LKYL++GA SS I L Sbjct: 75 FEGDNLSIVFRAIIALSTASTVLMSIRYVEQAGTSLAEFLAIMLTATLGGMFLSGASELVMIFISLEMLSISSYLMTGYMKRDPRSNEAALKYLLIGASSSAIFL 179
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_SOLTU (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Solanum tuberosum GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_SOLLC (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Solanum lycopersicum GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_SOLBU (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Solanum bulbocastanum GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_PANGI (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Panax ginseng GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_NICTO (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Nicotiana tomentosiformis GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202
BLAST of DY305936 vs. ExPASy Swiss-Prot
Match: NU2C2_NICSY (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Nicotiana sylvestris GN=ndhB2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.592e-11 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 420 FRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL---VWLF 746 F+ +NF Q L+LL + I + ++ E EF++ +L +T +F+ A DLI +++A E SLC Y+++ +K S EA +KYL++G SS IL+ WL+ Sbjct: 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLY 202 The following BLAST results are available for this feature:
BLAST of DY305936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305936 ID=DY305936; Name=DY305936; organism=Citrus sinensis; type=EST; length=1295bpback to top |