DY305930

Overview
NameDY305930
Unique NameDY305930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_KLULA (Translationally-controlled tumor protein homolog OS=Kluyveromyces lactis GN=KLLA0C12716g PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.703e-13
Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 337
            +DIGANPS                V ++V +FRLQ Q AFDKK F+TY+K ++K +  +L E   +   +F+K  +   K ++    D +FF GESM  DG LV   Y+E  T P
Sbjct:   42 IDIGANPSAEDGGDDVEDGTEL--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKEIKGRLQESNPDEVSVFEKGAQAYVKKVIGSFKDWEFFTGESMDPDGMLVLLNYREDGTTP 153          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_USTMA (Translationally-controlled tumor protein homolog OS=Ustilago maydis GN=UM01283 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.142e-13
Identity = 44/128 (34.38%), Postives = 67/128 (52.34%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            VDIGANPS               +V++IV +FRLQ    FDKK ++ Y+K ++K +  KL+E   +R   F+K      K ++   +D +FF GESM  +G +    Y+E    P  ++  D L+E K
Sbjct:   30 VDIGANPSAEEAAEALENGAE--QVINIVHSFRLQSTQ-FDKKSYLAYLKGYMKSVKAKLAESNPDRVPAFEKGAAAFAKKIVGSFNDWEFFTGESMDPEGMVALLNYREDGVTPYLVFWKDGLRETK 154          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_PLAF7 (Translationally-controlled tumor protein homolog OS=Plasmodium falciparum (isolate 3D7) GN=TCTP PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.022e-13
Identity = 38/104 (36.54%), Postives = 63/104 (60.58%), Query Frame = 2
Query:   74 VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            V+DIVD+F+L    AF KK++  Y+K +++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  ++++YYK     P F+YI+D L E K
Sbjct:   68 VIDIVDSFQLTST-AFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPFIKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_PLACH (Translationally-controlled tumor protein homolog OS=Plasmodium chabaudi GN=TCTP PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.368e-12
Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 2
Query:   74 VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            V+DIVD+F+L    +  KK++  Y+K F++ +   L E   +R EIFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+YI+D L E K
Sbjct:   68 VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVEIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAE (Translationally-controlled tumor protein homolog OS=Aedes aegypti GN=Tctp PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.368e-12
Identity = 44/105 (41.90%), Postives = 56/105 (53.33%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 376
            VDIV   RL E    DKKQF TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   66 VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPVLLCFKHGLEEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAL (Translationally-controlled tumor protein homolog OS=Aedes albopictus GN=Tctp PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12
Identity = 44/105 (41.90%), Postives = 56/105 (53.33%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 376
            VDIV   RL E    DKKQF TY+K ++K L  +L E      E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   66 VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESTPILLCFKHGLEEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_SCHPO (Translationally-controlled tumor protein homolog OS=Schizosaccharomyces pombe GN=p23fy PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            VDIGANPS                V ++V +FRL    +FDKK +++Y+K ++K +  +L E   ER  +F+KN  G  K +L+   D  F++GESM  D  +V   Y+E    P  ++  D L   K
Sbjct:   43 VDIGANPSAEDAEENAEEGTET--VNNLVYSFRLSPT-SFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKILANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_ANOGA (Translationally-controlled tumor protein homolog OS=Anopheles gambiae GN=Tctp PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.334e-12
Identity = 44/105 (41.90%), Postives = 57/105 (54.29%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ---EIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 376
            VDIV   RL E    DKKQF TY+K ++K L  +L E+     E+FK NI    K LL +  DLQFF GESM  +G +    Y+  +G + P  L     L+E K
Sbjct:   66 VDIVLNHRLVETGFSDKKQFTTYLKDYMKKLVTRLEEKSPGEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLEYRDIDGESVPVLLCFKHGLEEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_YARLI (Translationally-controlled tumor protein homolog OS=Yarrowia lipolytica GN=YALI0E27071g PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            VDIGANPS                V ++V +FRLQ    FDKK ++TY+K ++K +   L+E   E  E F+K  +   K +++   D  F+ GESM  DG +    Y+E  T P  ++    +KE K
Sbjct:   42 VDIGANPSAEDAEEGVDSDVQT--VNNVVHSFRLQST-GFDKKSYLTYLKGYMKSIKNYLAENKPEEVENFEKGAQAYAKKIVANFKDFDFYTGESMDPDGMVALLNYREDGTTPYLIFWKHGIKEEK 166          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_THEAN (Translationally-controlled tumor protein homolog OS=Theileria annulata GN=TCTP PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 2
Query:   74 VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKE 370
            VVD+VD F LQ  P   KK + +Y+K++I+ L   L E   ER E FK ++    K +L+   D +F+VGES+  +  LV+ YYK     P  +++ D L E
Sbjct:   70 VVDVVDKFALQSLP-LTKKDYSSYIKKYIQRLVATLQEKNPERVEPFKTSVSEFVKHVLANFDDFEFYVGESLDYEAGLVYGYYKGEEVSPRLVFLKDGLVE 170          
The following BLAST results are available for this feature:
BLAST of DY305930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
TCTP_KLULA4.703e-1338.26Translationally-controlled tumor protein homolog O... [more]
TCTP_USTMA6.142e-1334.38Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAF78.022e-1336.54Translationally-controlled tumor protein homolog O... [more]
TCTP_PLACH1.368e-1236.54Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAE1.368e-1241.90Translationally-controlled tumor protein homolog O... [more]
TCTP_AEDAL1.787e-1241.90Translationally-controlled tumor protein homolog O... [more]
TCTP_SCHPO2.334e-1234.38Translationally-controlled tumor protein homolog O... [more]
TCTP_ANOGA2.334e-1241.90Translationally-controlled tumor protein homolog O... [more]
TCTP_YARLI3.048e-1234.38Translationally-controlled tumor protein homolog O... [more]
TCTP_THEAN3.048e-1238.24Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DG01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305930 ID=DY305930; Name=DY305930; organism=Citrus sinensis; type=EST; length=578bp
GGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATGAGG
GTGTTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTCAGG
CTGCAGGAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACATGAA
GAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGA
TATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTC
AGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCATGATGATGGCTGTCT
TGTCTTTGCTTACTACAAGGAAGGTGCGACCGACCCAACATTTTTGTATA
TTGCTGATGCATTGAAGGAGGTGAAGTGCTAAGCCGGGCTTCGAAGAGGA
AGTGCCTGCTGTAGTTCTAGTTTTAATTATTGCCCGCGGTTATTTTTATG
TATCTTTTGTACTGGTTTACTCGGGACTTGTGCTTGCTGTTTTTTAGTTT
TTATTTTGACATAAACAATATGTTTTTCTGCTCCTAATTATTGGGTTTTA
TGGTTTGAGATTGAATTACCAAATAACT
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