DY305930

Overview
NameDY305930
Unique NameDY305930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_PLAYO (Translationally-controlled tumor protein homolog OS=Plasmodium yoelii yoelii GN=TCTP PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 2
Query:   74 VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            V+DIVD+F+L    +  KK++  Y+K F++ +   L E   +R +IFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+YI+D L E K
Sbjct:   68 VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVDIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 379
            VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L E KC
Sbjct:   66 VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLDEEKC 172          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_PLAKN (Translationally-controlled tumor protein homolog OS=Plasmodium knowlesi GN=TCTP PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12
Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 2
Query:   71 KVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            +V+DIVD+F+L    +  KK++  Y+K +++ +   L E   +R ++FK   +   K +L+   D +F++GES+  D  L ++YYK     P F+YI+D L E K
Sbjct:   67 QVIDIVDSFQLTST-SLSKKEYSVYIKNYMQKILKYLEEKKPDRVDVFKTKAQPLIKHILTNFDDFEFYMGESLDMDAGLTYSYYKGEEVTPRFVYISDGLYEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_PLABA (Translationally-controlled tumor protein homolog OS=Plasmodium berghei (strain Anka) GN=TCTP PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2
Query:   74 VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            V+DIVD+F+L    +  KK++  Y+K F++ +   L E   +R  IFK   +   K +L+   D +F++GES+  +  L+++YYK     P F+YI+D L E K
Sbjct:   68 VIDIVDSFQLTST-SLSKKEYSAYVKNFMQRILKHLEEKKPDRVNIFKTKAQPLIKHILTNFDDFEFYMGESLDMEAGLIYSYYKGEEITPRFVYISDGLFEEK 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_YEAST (Translationally-controlled tumor protein homolog OS=Saccharomyces cerevisiae GN=TMA19 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.791e-12
Identity = 44/115 (38.26%), Postives = 60/115 (52.17%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 337
            +DIGANPS                V ++V +FRLQ Q AFDKK F+TY+K ++K +  KL E   E    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:   42 IDIGANPSAEGGDDDVEEGAEM--VNNVVHSFRLQ-QTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_DROPS (Translationally-controlled tumor protein homolog OS=Drosophila pseudoobscura pseudoobscura GN=Tctp PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.791e-12
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 379
            VD+V   RL E  AF DKK +  Y+K ++K +  KL+E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   66 VDVVLNHRLVECFAFGDKKSYTLYLKDYMKKVLAKLAEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREIDGQSIPVLMFFKHGLEEEKC 172          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_DROME (Translationally-controlled tumor protein homolog OS=Drosophila melanogaster GN=Tctp PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.791e-12
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVKC 379
            VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:   66 VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_LATJA (Translationally-controlled tumor protein homolog OS=Lateolabrax japonicus GN=tpt1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12
Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE---IFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 379
            VDIV   +LQE  +FDKK +  Y+K ++K +  KL EE+ E    F  ++    K +L+ L + QFF GE+M+ +G +    Y+E  T P  L+  D L   KC
Sbjct:   68 VDIVLNHKLQET-SFDKKSYKVYIKDYVKAIKQKLQEEKPERVDAFMADVAEEVKEILNNLKNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_THEPA (Translationally-controlled tumor protein homolog OS=Theileria parva GN=TCTP PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 2
Query:   74 VVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKE 370
            VVD+VD F LQ   +  KK + +Y++++I+ L   L E   ER E FK  +    K +L+   D +F+VGES+  +  LV+AYYK     P  +++ D L E
Sbjct:   70 VVDVVDKFGLQSL-SLTKKDYSSYIRKYIQRLVATLQEKNPERVEPFKTTVSDFVKHVLANFEDFEFYVGESLDYEAGLVYAYYKGEEVSPRLVFLKDGLVE 170          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_DEBHA (Translationally-controlled tumor protein homolog OS=Debaryomyces hansenii GN=DEHA2E17468g PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.976e-11
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKF---LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 337
            VDIGANPS                V ++V +FRLQ Q +FDKK F+TYMK ++K +   L+E+  E  +    GA  +   ++S   D  F+ GESM  DG +V   Y+E  T P
Sbjct:   42 VDIGANPSAEEGGEDLEDGTET--VNNVVYSFRLQ-QTSFDKKSFMTYMKGYMKRVKAHLAEKNPEAIEAFENGAKTYFKKVVSSFGDWDFYTGESMDPDGMVVLLNYREDGTTP 153          
The following BLAST results are available for this feature:
BLAST of DY305930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
TCTP_PLAYO3.048e-1235.58Translationally-controlled tumor protein homolog O... [more]
TCTP_DROYA3.048e-1239.25Translationally-controlled tumor protein homolog O... [more]
TCTP_PLAKN3.981e-1234.29Translationally-controlled tumor protein homolog O... [more]
TCTP_PLABA5.200e-1235.58Translationally-controlled tumor protein homolog O... [more]
TCTP_YEAST6.791e-1238.26Translationally-controlled tumor protein homolog O... [more]
TCTP_DROPS6.791e-1238.32Translationally-controlled tumor protein homolog O... [more]
TCTP_DROME6.791e-1239.25Translationally-controlled tumor protein homolog O... [more]
TCTP_LATJA8.869e-1237.50Translationally-controlled tumor protein homolog O... [more]
TCTP_THEPA1.513e-1137.25Translationally-controlled tumor protein homolog O... [more]
TCTP_DEBHA1.976e-1138.26Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DG01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305930 ID=DY305930; Name=DY305930; organism=Citrus sinensis; type=EST; length=578bp
GGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATGAGG
GTGTTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTCAGG
CTGCAGGAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACATGAA
GAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGA
TATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTC
AGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCATGATGATGGCTGTCT
TGTCTTTGCTTACTACAAGGAAGGTGCGACCGACCCAACATTTTTGTATA
TTGCTGATGCATTGAAGGAGGTGAAGTGCTAAGCCGGGCTTCGAAGAGGA
AGTGCCTGCTGTAGTTCTAGTTTTAATTATTGCCCGCGGTTATTTTTATG
TATCTTTTGTACTGGTTTACTCGGGACTTGTGCTTGCTGTTTTTTAGTTT
TTATTTTGACATAAACAATATGTTTTTCTGCTCCTAATTATTGGGTTTTA
TGGTTTGAGATTGAATTACCAAATAACT
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