DY305930

Overview
NameDY305930
Unique NameDY305930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11
Identity = 47/131 (35.88%), Postives = 66/131 (50.38%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ--EIFKKNIEGATKF----LLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 376
            V+IGAN S               KV +IV++FRLQ    FDKK ++ Y+K ++K +  KL E     E  K    GA+KF    ++ K  D +F+ GESM  DG +V   Y+E    P  ++    LKE K
Sbjct:   42 VNIGANASAEEAAEDLDDGAV--KVNNIVNSFRLQST-TFDKKSYLAYLKGYMKAIKAKLQENGSSAEDIKAFETGASKFVKDTIVPKFKDFEFYTGESMDPDGMVVLLNYREDGVTPYTIFWKHGLKETK 169          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_PLUXY (Translationally-controlled tumor protein homolog OS=Plutella xylostella GN=Tctp PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYIADALKEVK 376
            VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ ++FK N+    K +L +  +LQFF GESM  DG +    Y++  G + P  ++    L E K
Sbjct:   66 VDIVLNHRLMETYAFGDKKSYTLYLKDYMKKLVAKLEETAPDQVDVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMCEYRDINGVSTPVMMFFKHGLLEEK 171          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_BOMMO (Translationally-controlled tumor protein homolog OS=Bombyx mori GN=Tctp PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.508e-11
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYIADALKEVK 376
            VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ E+FK N+    K +L +  +LQFF GESM  DG +    Y+  +G   P  ++    L+E K
Sbjct:   66 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 171          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_LABRO (Translationally-controlled tumor protein homolog OS=Labeo rohita GN=tpt1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.806e-11
Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 2
Query:   77 VDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 379
            VDIV   +LQE  ++DKK +  Y+K ++K +  KL E   +R + F  N     K +L  + + QFF GESM+ DG +    ++E    P  L+  D L+  KC
Sbjct:   69 VDIVLNHKLQET-SYDKKSYTAYIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKKILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMLFFKDGLEIEKC 171          
BLAST of DY305930 vs. ExPASy Swiss-Prot
Match: TCTP_CANGA (Translationally-controlled tumor protein homolog OS=Candida glabrata GN=CAGL0L12870g PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.806e-11
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 2
Query:    2 VDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEI---FKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 337
            +DIGANPS                V ++V +FRLQ    FDKK F+TY+K ++K +  KL E+  +    F+K  +   K ++    D +FF GESM  D  +V   Y+E  T P
Sbjct:   42 IDIGANPSTEDGEDDVEDGTEV--VNNVVHSFRLQPT-GFDKKSFLTYIKGYMKAVKAKLQEKNPDAIPTFEKGAQVYVKKVIGSFKDWEFFTGESMDPDAMVVMLNYREDGTTP 153          
The following BLAST results are available for this feature:
BLAST of DY305930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
TCTP_GIBZE2.581e-1135.88Translationally-controlled tumor protein homolog O... [more]
TCTP_PLUXY4.402e-1137.74Translationally-controlled tumor protein homolog O... [more]
TCTP_BOMMO7.508e-1138.68Translationally-controlled tumor protein homolog O... [more]
TCTP_LABRO9.806e-1135.58Translationally-controlled tumor protein homolog O... [more]
TCTP_CANGA9.806e-1135.65Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DG01RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305930 ID=DY305930; Name=DY305930; organism=Citrus sinensis; type=EST; length=578bp
GGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGATGAGGATGAGG
GTGTTGATGACCAAGCCGTGAAGGTGGTCGACATTGTCGACACATTCAGG
CTGCAGGAGCAACCTGCTTTTGACAAGAAGCAGTTTGTAACATACATGAA
GAGATTCATCAAGTTGCTGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGA
TATTTAAGAAGAATATTGAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTC
AGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCATGATGATGGCTGTCT
TGTCTTTGCTTACTACAAGGAAGGTGCGACCGACCCAACATTTTTGTATA
TTGCTGATGCATTGAAGGAGGTGAAGTGCTAAGCCGGGCTTCGAAGAGGA
AGTGCCTGCTGTAGTTCTAGTTTTAATTATTGCCCGCGGTTATTTTTATG
TATCTTTTGTACTGGTTTACTCGGGACTTGTGCTTGCTGTTTTTTAGTTT
TTATTTTGACATAAACAATATGTTTTTCTGCTCCTAATTATTGGGTTTTA
TGGTTTGAGATTGAATTACCAAATAACT
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