DY305929

Overview
NameDY305929
Unique NameDY305929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1268
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 6.340e-52
Identity = 99/117 (84.62%), Postives = 110/117 (94.02%), Query Frame = -3
Query:  241 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 591
            MAKSSFK EH LE+R+AE+ARIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N+LPP  A+MS++YEE KD+DGFLY+TYSGENTFG
Sbjct:    1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 4.544e-50
Identity = 96/114 (84.21%), Postives = 104/114 (91.23%), Query Frame = -3
Query:  241 SSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 582
            SSFK EHP E+RQAE+ RIR KYPDRIPVI EKA+RSDIPDIDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIF+ N+LPPTAA+MS IYEE KD DGFLY+TYSGENTFG
Sbjct:    2 SSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.119e-48
Identity = 92/119 (77.31%), Postives = 109/119 (91.60%), Query Frame = -3
Query:  235 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 591
            M+  SF+ +H  E+R+AE+ RIREKY DR+PVIVEK+E+SDIP+IDKKKYLVPADLTVGQFVYV+RKRI+LSAEKAIFIFV N+LPPT AMMS IY+ENK+EDGFLY+TYSGENTFG+S
Sbjct:    1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGSS 119          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.554e-48
Identity = 90/116 (77.59%), Postives = 107/116 (92.24%), Query Frame = -3
Query:  235 SSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 582
            S FK++   E+R+AE+ RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVYV+RKRIKLSAEKAIFIFV N+LPPT  +MS++YE+ KDEDGFLY+TYSGENTFGAS
Sbjct:    5 SIFKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGAS 120          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 2.757e-47
Identity = 90/115 (78.26%), Postives = 106/115 (92.17%), Query Frame = -3
Query:  241 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 585
            +S FK EHP E+R+AE+ RIR+KY DR+PVI EK E+SDIP IDKKKYLVPADLTVGQFVYV+RKRIKLS+E+AIFIFV ++LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRRAEAERIRKKYDDRVPVICEKVEKSDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTFG 116          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 2.757e-47
Identity = 90/115 (78.26%), Postives = 105/115 (91.30%), Query Frame = -3
Query:  241 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 585
            +S FK EHP E+R+AE+ RIR+KYPDRIPVI EKA+R+DIP IDKKKYLVP+DLTVGQFVYV+RKRIKL+ EKAIFIFV  +LPPTAA+MSAIYEE+KDED FLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFG 116          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 8.021e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = -3
Query:  241 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 585
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 8.021e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = -3
Query:  241 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 585
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 8.021e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = -3
Query:  241 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 585
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 8.021e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = -3
Query:  241 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 585
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of DY305929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8F_ARATH6.340e-5284.62Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8_PHYIN4.544e-5084.21Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8G_ARATH1.119e-4877.31Autophagy-related protein 8g OS=Arabidopsis thalia... [more]
ATG8E_ARATH5.554e-4877.59Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8_YARLI2.757e-4778.26Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_LACBI2.757e-4778.26Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_PODAN8.021e-4779.13Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PENCW8.021e-4779.13Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEUCR8.021e-4779.13Autophagy-related protein 8 OS=Neurospora crassa G... [more]
ATG8_NEOFI8.021e-4779.13Autophagy-related protein 8 OS=Neosartorya fischer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM2DF12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305929 ID=DY305929; Name=DY305929; organism=Citrus sinensis; type=EST; length=1268bp
AATCCAACAGTACCTGTATTAACTTGCTCATCCAATATGAAATCACGAAT
ATTTACTGCAACAAATAAGATAAAGAGGAGTAACAATAGATCCAAACTTT
AAGAAGGGGCTGAGTCCAGGAAGATCATGCTTTCCAAGTGCTCCCTCAGT
TGAAAGCAAATAGCAAAGGATTTACATATTTCCATCAAGTCTTTTCAGAG
TTAATCTACAGAAGTTCAGTTGATTCCCTTAGAAAGATGCCCCGAATGTG
TTCTCCCCACTGTAAGTCATGTAAAGGAAGCCATCCTCATCTTTGTTTTC
CTCATAAATTGCAGACATCATTGCAGCAGTGGGTGGCAAAATGTTCTTGA
CAAATATGAATATGGCCTTCTCAGCACTGAGCTTTATCCTCTTCCGGACC
ACATAAACAAATTGTCCAACAGTCAGATCAGCAGGAACCAGGTATTTTTT
TTTGTCAATATCAGGTATGTCACTCCTTTCAGCCTTCTCCACAATCACTG
GTATTCTATCAGGATACTTCTCCCTGATACGGGCAGATTCAGCCTGCCTC
CTTTCGAGTGGGTGTTCAAGCTTGAAGGAGCTCTTGGCCATAGCTTCTCC
TTGTTCTTTCTACTGCTTCCAAGGGGAAAATGAATATGAATCGACGGATT
AAAATAAATCCTCGTGCCGAATTCGGCACGAGGCTTCAAAGCCCTTACGA
AATGCCGCAAGGAGATTACATAGAGCTTCACAGGAAGCGAAATGGCTACC
GTCTCGATCACTTCGAGCGCAAGCGCAAGAAGGAGGCGCGTGAATTCCAT
AACCGCTTCGAAATTGCCCAAAAAGGCTTTGGGTATTAAGGGCAAGATGT
TTGCTAAAAAACCCCTTTGCTGAAAAGGCTCCTCATTGAAAAAACTTTGG
CTTATCCTTGAAGAATCATCAAGTCCTAAAAAAGGTGGATGAATAAGTTT
CAAGAAGGGTCCTTTTCCCTGCTTTTTTGTTTTGTTCGTGAAACCCCAAA
AAAAAACCGAAAGTTGCTTTAACCCAAAAATAAAAAACAAAAAAAAAAAA
AAAAAAAAGCTTGGAAAAAGGGGGAAAGTCACCCCTTTCCCCCACGGTTT
TGGCCCCCCCTATCGGAAAAAAAAAAGAAATTGTTTTTTTAATTCTTTCA
AAAAATTTCTGGTAAACACCAAAAAAAACACCCCACCCCAAGTTGGAGAA
AAAAAAAAAGGAGGGGTCCCCCCACAAAGGGCCCCCCCCCCCTATTTTTT
TTTTTTTTTTGGAAGCCC
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