DY305929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 6.821e-30 Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = -3 Query: 241 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDE-DGFLYMTYSGENTFG 591 M FK E LE R ESA + YPDRIPVIVEK RS++P+++K+KYLVP ++ VGQF++++R R+ LS A+F+FV N LP TA +M ++YE KDE DGFLY+ YS E TFG Sbjct: 1 MKPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.592e-29 Identity = 61/113 (53.98%), Postives = 81/113 (71.68%), Query Frame = -3 Query: 241 SFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 579 SFK + + R ES I KYPDRIPVI+EK +D+PD++K KYLVP D+TVG F++++ KR++L KA+F+FV N LP TA+ M ++Y K+EDGFLYM YS E TFG Sbjct: 7 SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.559e-21 Identity = 53/114 (46.49%), Postives = 76/114 (66.67%), Query Frame = -3 Query: 241 FKLEHPLERRQAESARIREKYPDRIPVIVEKAERSD-IPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN-ILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 576 FK L RQ E A IR K+P++IPV+VE+ R +P +DK K+LVP +LT+ QF+ ++R R+ L A +A ++ V N L +A M+ IY + KDEDGF+YMTY+ + TFG Sbjct: 13 FKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 5.990e-18 Identity = 43/118 (36.44%), Postives = 76/118 (64.41%), Query Frame = -3 Query: 241 AKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAE-RSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVK-NILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 588 ++ +FK E+R + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + ++R+R++L+A +A F+ V + + + +S +YE KDEDGFLYM Y+ + TFG Sbjct: 3 SEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFG 120
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.022e-17 Identity = 42/120 (35.00%), Postives = 77/120 (64.17%), Query Frame = -3 Query: 235 AKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAE-RSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVK-NILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 588 ++ +FK E+R + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + ++R+R++L+A +A F+ V + + + +S +YE +DEDGFLYM Y+ + TFG + Sbjct: 3 SEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFGTA 122
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.022e-17 Identity = 42/120 (35.00%), Postives = 77/120 (64.17%), Query Frame = -3 Query: 235 AKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAE-RSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVK-NILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 588 ++ +FK E+R + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + ++R+R++L+A +A F+ V + + + +S +YE +DEDGFLYM Y+ + TFG + Sbjct: 3 SEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFGTA 122
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MLP3B_BOVIN (Microtubule-associated proteins 1A/1B light chain 3B OS=Bos taurus GN=MAP1LC3B PE=1 SV=4) HSP 1 Score: 90.5077 bits (223), Expect = 2.276e-17 Identity = 42/118 (35.59%), Postives = 75/118 (63.56%), Query Frame = -3 Query: 241 AKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAE-RSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVK-NILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 588 ++ +FK E+R + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + ++R+R++L+A +A F+ V + + + + +YE KDEDGFLYM Y+ + TFG Sbjct: 3 SEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPICEVYESEKDEDGFLYMVYASQETFG 120
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MP3B2_HUMAN (Microtubule-associated proteins 1A/1B light chain 3 beta 2 OS=Homo sapiens GN=MAP1LC3B2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.622e-17 Identity = 42/118 (35.59%), Postives = 75/118 (63.56%), Query Frame = -3 Query: 241 AKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAE-RSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVK-NILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 588 ++ +FK E+R + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + ++R+R++L+A +A F+ V + + + +S +YE KDEDGFLYM + + TFG Sbjct: 3 SEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETFG 120
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MLP3A_BOVIN (Microtubule-associated proteins 1A/1B light chain 3A OS=Bos taurus GN=MAP1LC3A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.130e-16 Identity = 43/114 (37.72%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 241 FKLEHPLERRQAESARIREKYPDRIPVIVEKAE-RSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFV-KNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 576 FK R E +IRE++P +IPVI+E+ + +P +DK K+LVP + + + V ++R+R++L+ +A F+ V ++ + + ++ IYE+ KDEDGFLYM Y+ + TFG Sbjct: 7 FKQRRSFADRCKEVQQIREQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY305929 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.516e-16 Identity = 42/114 (36.84%), Postives = 73/114 (64.04%), Query Frame = -3 Query: 241 FKLEHPLERRQAESARIREKYPDRIPVIVEKAE-RSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFV-KNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 576 FK R E +IR+++P +IPVI+E+ + +P +DK K+LVP + + + V ++R+R++L+ +A F+ V ++ + + ++ IYE+ KDEDGFLYM Y+ + TFG Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120 The following BLAST results are available for this feature:
BLAST of DY305929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305929 ID=DY305929; Name=DY305929; organism=Citrus sinensis; type=EST; length=1268bpback to top |